Gene TM1040_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0180 
Symbol 
ID4078412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp199436 
End bp200230 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID638005474 
Productenoyl-[acyl-carrier-protein] reductase [NADH] 
Protein accessionYP_612175 
Protein GI99080021 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.26134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGGAG TATTGACCGG CAAACGGGGC CTGATCATGG GCGTTGCAAA CGAACGCTCT 
ATCGCTTGGG GGATCGCCAA GGCGATGCAT GAGGCAGGGG CCGAGCTGGC CTTTACCTAC
CAGGGCGAAG CCTTCGGCAA ACGTCTTGAG CCGCTTGCGG CCTCGGTGGA CAGCGACTTC
ATGGTGGACG TGGATGTCAC CGACGATGCC TCGCTGGATA CGGCGTTCGC ACAACTGGGC
GCCCGCTGGC CAAAGATTGA TTTCCTTGTC CACGCGATTG CGTATTCGGA CAAAAACGAG
CTCACCGGCC GGTTCATCAA CACCAGTCGT GCGAACTTCA AGAACTCCAT GGATATCTCT
GCCTATTCCT TCATCGAGGT GGCGCGCCGC GCCTACCCGC TGATGCAGGA AAACGGCGGC
GGCACGATGA TGACGCTCAC CTACGGTGGC TCCAATCGCG TGACGCCGAA CTACAATGTG
ATGGGTGTGG CCAAGGCCGC ATTGGAAAGC GCCACGCGCT ATCTGGCCAA TGACCTTGGT
CCCGATGGCA TCCGCGTAAA TGCGATTTCC CCCGGCCCGA TGAAAACCCT CGCCGGGGCT
GCGATCGGTG GTGCGCGCAA GACCTACAAG CATACCGAGC AGAACGCTCC GCTGCGGTCG
AACGCCACGC TTGAGGCCGT CGGCGGCACC GCCGTCTACC TGGCGTCCGA CGCGGGCGCC
TATACCACGG GCGAGATCAT CCGCGTTGAT GGCGGCTTCC ATGTGCTTGG CATGCCCCAA
CAAGAACACC TCTGA
 
Protein sequence
MTGVLTGKRG LIMGVANERS IAWGIAKAMH EAGAELAFTY QGEAFGKRLE PLAASVDSDF 
MVDVDVTDDA SLDTAFAQLG ARWPKIDFLV HAIAYSDKNE LTGRFINTSR ANFKNSMDIS
AYSFIEVARR AYPLMQENGG GTMMTLTYGG SNRVTPNYNV MGVAKAALES ATRYLANDLG
PDGIRVNAIS PGPMKTLAGA AIGGARKTYK HTEQNAPLRS NATLEAVGGT AVYLASDAGA
YTTGEIIRVD GGFHVLGMPQ QEHL