Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0106 |
Symbol | |
ID | 4078691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 112632 |
End bp | 113774 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638005393 |
Product | saccharopine dehydrogenase (NADP+, L-glutamate forming) |
Protein accession | YP_612101 |
Protein GI | 99079947 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTC ACTGGTGCGG CACCGGCCTC TCCGCCATTC CCGGCCTGCG TCGCCTGCTC GAAGCGGGTC ACGACGTCGC CGTCTGGAAC CGCACACCCG AAAAAGCCGC CGAGGCTGTT GGGGATCTGA CCACCAACAT CCACAAATTC TCCATTGCAC GCCTCTCGGA GCTTCTGAGC CCGGCGGACG TCGTGGTCTC CATGCTGCCC GGCGACTGGC ATGTGGAACT CGCCGAGCTC GCAATTTCCA AGGGGGCGCA TTTTGTGTCC TCCTCCTACA TCTCGCCGGA GATGCGCGCC CTCGACCAAA AGGCCAAAGA CGCCGGAGTC GCGCTGGTCA ATGAGGTCGG GCTTGATCCG GGCATCGATC ACCTGATGGC CCATGCCCTC GTGGCTGAAT ACGCGGAATC TCCGGCCTTC GACGCGGACA ATGAGATCAG CTTTCTGTCC TATTGCGGCG GCATCCCAAA GATCCCGAAC CCATTTCGCT ACAAGTTCAG CTGGTCGCCC CTCGGCGTGC TGAAGGCCCT GCGCTCGCCC TCGCGCTCGA TCCGCGATTT TGAGGTTCTG GACGTGGCGC GCCCCTGGGA TGCGATCTCG AGCTATGACG CGCCGCTTGC GACGCCCGAA ACCTTTGAGG TTTATCCCAA CCGCGACAGT CTGCCGTTCA TGGAGCAGTA TCACTTCGAC AAGGACTGGA AGGTCAAAAC CTTCGTGCGC GGCACCCTAC GTCTGAATGG CTGGACCGAG GCCTGGGCGG ATGTCTTCAA AGAAGTCGAA ACGCTTGAAG GCCCCGAAGG CGATGCTCGC CTCAAGGAAA TGTCCGATCA GTTCTGGGAC GAAAACGCCT ATGACGAAGG CGAGCCGGAT CGCGTGGTGC TCTGTGTGGA CCTCAAGGCG GAAAAAGACG GCCAGACCAA GTGGCACAAG ACCTATGTGA TGGACGCATG GGGCGACGAG CGCGGAAGCG CCATGGCGCG TCTGGTGTCC TATCCGGTGT CCTACGCCAT TGAGGCCGCG ATGAACGGCA AGATCGCACC CGGCGTCAGC GCCGCGCCCA GCGATCCGGC GCTGGTGGAC AGCTGGATGG GGCGCATCGG CGCACTGGCG CAGCACCTTC AGGTGGTGTC CCACCGCTCC TGA
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Protein sequence | MTIHWCGTGL SAIPGLRRLL EAGHDVAVWN RTPEKAAEAV GDLTTNIHKF SIARLSELLS PADVVVSMLP GDWHVELAEL AISKGAHFVS SSYISPEMRA LDQKAKDAGV ALVNEVGLDP GIDHLMAHAL VAEYAESPAF DADNEISFLS YCGGIPKIPN PFRYKFSWSP LGVLKALRSP SRSIRDFEVL DVARPWDAIS SYDAPLATPE TFEVYPNRDS LPFMEQYHFD KDWKVKTFVR GTLRLNGWTE AWADVFKEVE TLEGPEGDAR LKEMSDQFWD ENAYDEGEPD RVVLCVDLKA EKDGQTKWHK TYVMDAWGDE RGSAMARLVS YPVSYAIEAA MNGKIAPGVS AAPSDPALVD SWMGRIGALA QHLQVVSHRS
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