Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0062 |
Symbol | |
ID | 4075959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 67002 |
End bp | 67589 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005349 |
Product | hypothetical protein |
Protein accession | YP_612057 |
Protein GI | 99079903 |
COG category | [S] Function unknown |
COG ID | [COG4764] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0191236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGAA TCATAAGTGC CCTGGCGCTG TTGTTGGCAT TGGCCGCCTG TGGTGGAGGG TATAACTCTC CGCCTCGGGA TCTGGACGAT GCCTGCAGTA TTGTGACGGA ACGCCCCAAC TACCTGCGCG CGTTCAAGAA TACCGAGCGC CGTTGGGGAA TCCCGGTCCA TGTCCAGATG GCCACAATCC ATCAAGAAAG CCGCTTTGTC GGAAATGCGC GCACGCCACA TAGGTTCGCG CTCGGCATCA TTCCGATGGG CCGCATCTCG AGCGCCTATG GTTACGGTCA GGCTCTGGAT GGCACCTGGG AAGACTATAA AGATGATACC GGGCGCCGCA GGGCGCGACG GGATCGCATC GAGGACGCCA CCGATTTCAT GGGCTGGTAC ATGACCCGCA GTCTGCAGCG AAACGGCATC CCGCTCTCGG ACGCTCGCAA TCAGTATCTC GCCTATCATG AGGGCCACAC CGGCTATGCA CGCGGCACCT ACCGCAGCAA GGGATGGCTT TTGAACGTGG CAAACAAGGT CGAGGCGCGC TCGAACGCCT ATCAGGTGCA GCTGAGCAAT TGCCGCAAGT TCCGTTGA
|
Protein sequence | MSRIISALAL LLALAACGGG YNSPPRDLDD ACSIVTERPN YLRAFKNTER RWGIPVHVQM ATIHQESRFV GNARTPHRFA LGIIPMGRIS SAYGYGQALD GTWEDYKDDT GRRRARRDRI EDATDFMGWY MTRSLQRNGI PLSDARNQYL AYHEGHTGYA RGTYRSKGWL LNVANKVEAR SNAYQVQLSN CRKFR
|
| |