| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0043 |
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| Symbol | |
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| ID | 4078706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 45518 |
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| End bp | 46546 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005330 |
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| Product | DNA polymerase III, delta subunit |
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| Protein accession | YP_612038 |
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| Protein GI | 99079884 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.302173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA GCCCGCGCGA GGCCGAGGGC TATTTCGCCC GCCCTGACCC CGGCAAGACC
GGGCTGTTGA TCTACGGTGC GGACGCCATG CGCGTCTCGC TCAAGCGCCA GCAGATGCTG
GCTGCGCTCC TCGGACCGGG TGCGGAGGAG GAGATGCGCC TCACGCGGAT GCCCGCAAGC
GAACTGCGCA AGGATCCCGC GCAGCTTCTG GACGCGGTCA AGGCGGTCGG TTTCTTTCCC
GGCATTCGCG CCGTGTTTGT CGAGGATGCC AATGATTCTG CGACCCCGGC GATCACCACC
GCGCTCGAGG CCTGGCAACC CGGCGATGCG CAGATCGTTG TGACGGCAGG TCAGCTCAAG
GCGTCATCCA AACTGCGCAA GGCGTTTGAA ACTCATACCA ATGCCTATGC GACCGGCATC
TATGACGATC CTCCCTCGCG TGCAGAAATT GAGCGAATCC TGAGTGAAGC AGGCGTACGG
GATGTGCCGG GCGACAGCAT GTCTGCGCTC GCGGATATCG CCAATGACAT TGGTCCCGGC
GATTTTTCCC GAATGATCGA GAAACTGAGC CTCTACAAAA ATGGCGACAA CAGCCCGCTG
ACGCTGGAGG ACATCGACGC CGTGGCCCCG CAATCCACAG AGGCGGCGCT CGACGATCTC
CTAAATGTGG TGGCTGAGGG GCGCAGTGCC GACATCGGTC CGGTCCTGCG AAGGCTGCAG
GCTCAGGGCA CCAATGCGGT GACGCTCTGC ATCGGGGCGA CTCGTCATTT TCGCACGCTC
TATACCATTG CCGCCCATCC CGGAGGTGCT GCCCAAGGCA TCGGAGGCCT GCGTCCGCCG
CTCTATGGCA AGCGCCGCGA TCGCATGCTG CGACAGGCAC AAGGCTGGGG GGCGCAGAAG
TTGCAAAACG CGCTGACGAT TCTGACCGAC ACCGACTTGC AATTGCGCTC CGCCGGGCAA
AGCGCACCTG CCCTTGCGTT GACAGAACGC GCGATGATCC GGCTTGCGAT GCTCGCCCGC
GCACGTTGA
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| Protein sequence | MKLSPREAEG YFARPDPGKT GLLIYGADAM RVSLKRQQML AALLGPGAEE EMRLTRMPAS
ELRKDPAQLL DAVKAVGFFP GIRAVFVEDA NDSATPAITT ALEAWQPGDA QIVVTAGQLK
ASSKLRKAFE THTNAYATGI YDDPPSRAEI ERILSEAGVR DVPGDSMSAL ADIANDIGPG
DFSRMIEKLS LYKNGDNSPL TLEDIDAVAP QSTEAALDDL LNVVAEGRSA DIGPVLRRLQ
AQGTNAVTLC IGATRHFRTL YTIAAHPGGA AQGIGGLRPP LYGKRRDRML RQAQGWGAQK
LQNALTILTD TDLQLRSAGQ SAPALALTER AMIRLAMLAR AR
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