Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3772 |
Symbol | |
ID | 4074944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | - |
Start bp | 16148 |
End bp | 17152 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638004431 |
Product | hypothetical protein |
Protein accession | YP_611167 |
Protein GI | 99077908 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5534] Plasmid replication initiator protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.0602576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCG CGCTAAGCGA GGCCGGAGGC TATCCCCCCG AAGGACAGGG GGCGTATTTC CTCTGCGATA TCTTTGATGC GATGCCTAAG AATGATCTGG CTTCGATGGA GCATCCGTTG TTTTCCCTCA GCACGCGCCC GGACCGGCGC ATCCTGAACT ACGAACACAA TGGGGCTGAG ATCACCGTGA CCCCGAGCGT CAAAGGGCTG GCGACGATTC ACGATAAGGA CATCCTGATC TTTTGTGTGA GCCAGCTGAT GGCGGCGCTC AATGCGGGCC GGCAGGTGAG CCGGGTGCTG CATCTCACGG CCCATGATCT CTTGGTGGCC TGCAACCGCG AAACCTCGGG CGATGCCTAT CGCCGCCTGC GCGAGTCCTT TGAGCGCCTC GCGGGCACGC GGATCACTAC CAATATCACC ACCGGCGGGC AGGAGATCAC TACCGGTTTT GGTCTTATCG AGAGCTGGGA GATCGTGCGC AAGGCCCGGG GCGGGCGTAT GGTCTCGGTG GCGGTGACGC TGTCGGACTG GCTCTATCGG GCGGTGCTGT CAAAATCGGT GCTGACCTTG AGCCGCGATT ATTTCCGGCT GAGGAAACCC TTGGAGCGGC GCATCTACGA GCTTGCGCGC AAACACTGCG GCCGTCAGGA CAGCTGGCAG ATCTCGGTTG AGACCCTCCT GAAGAAATCC GGCTCCGCCA GCCCGCGTCG GGTCTTTCGC AAGATGGTCC GCGATATGAT CGAAAGCCAG CCTCTGCCCG ATTACGAGAT GGCAGAGCTA GAAGGCGACA TCATCCGCTT CAGCCAGAAG GCCGCCGTGG TCGATGTGCC GCCGCCGGTG ATTTCAGAGG CGGCCCGCGA CGAGGCGCGC CGGTTGATGC CGGGGGTGGA TGTGCATGCG TTGGAGGCCG ACTGGCGCGC CACCTGGGCC CGCACCGGCG CCCCCCGCCT GCGCAAACCC GACGCGGCCT TTGTGGGCTG GGTGCGAAAG CGGATGAACG ACTGA
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Protein sequence | MTSALSEAGG YPPEGQGAYF LCDIFDAMPK NDLASMEHPL FSLSTRPDRR ILNYEHNGAE ITVTPSVKGL ATIHDKDILI FCVSQLMAAL NAGRQVSRVL HLTAHDLLVA CNRETSGDAY RRLRESFERL AGTRITTNIT TGGQEITTGF GLIESWEIVR KARGGRMVSV AVTLSDWLYR AVLSKSVLTL SRDYFRLRKP LERRIYELAR KHCGRQDSWQ ISVETLLKKS GSASPRRVFR KMVRDMIESQ PLPDYEMAEL EGDIIRFSQK AAVVDVPPPV ISEAARDEAR RLMPGVDVHA LEADWRATWA RTGAPRLRKP DAAFVGWVRK RMND
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