Gene Dgeo_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1872 
Symbol 
ID4058998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1969975 
End bp1970445 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID641230900 
Product30S ribosomal protein S7 
Protein accessionYP_605336 
Protein GI94985972 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.339504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTC GTCGCAGAGC AGAAGTGCGC CCACTCCAGC CCGACCTGGT CTACCAGGAT 
GTGCTGGTCA GCGCGATGAT CAACAAGATT ATGAGAGACG GCAAGAAGAA CCTTGCCAGC
CGCATCTTTT ATGGGGCTTG CCGCCTCGTG CAGGAGCGCA CCGGCCAAGA GCCGCTGAAG
GTGTTCAAGC AGGCCTTTGA CAACGTCAAG CCCCGCGTGG AGGTCCGCAG CCGCCGTGTG
GGTGGCAGCA CCTACCAGGT GCCGGTCGAG CCGACCGAGC GCCGTAAGCA AAGCCTGGCG
CTGCGTTGGA TGCTGAGCGC TGTGGAGGGC CGCCCCGAGC GCACGGCTAT CGAGCGCCTG
GCAGGTGAGA TGATGGATGC CGCGCAGGGC CGTGGCGGCG CGATCAAGAA GAAGGACGAC
GTGGAGCGCA TGGCGGAAGC CAACCGCGCC TACGCCCACT ACCGCTGGTA A
 
Protein sequence
MARRRRAEVR PLQPDLVYQD VLVSAMINKI MRDGKKNLAS RIFYGACRLV QERTGQEPLK 
VFKQAFDNVK PRVEVRSRRV GGSTYQVPVE PTERRKQSLA LRWMLSAVEG RPERTAIERL
AGEMMDAAQG RGGAIKKKDD VERMAEANRA YAHYRW