| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1234 |
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| Symbol | nusA |
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| ID | 4057743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1312999 |
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| End bp | 1314186 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641230248 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_604699 |
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| Protein GI | 94985335 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000227935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.970518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAAC CTGAATTTAA TTTTGCGGAC GCGTTGCGTG AAGTGGCGCA GGCCCGCAAC
ATCAATGAGC TGCAGCTGAT CGAGGCGTTC GAGCAGTCGC TCGCCCAGGC CTACAGCCGC
AACGTCGAAC CGGACCGCCG GGTGGAGGTG CACCTTGACC CGGTGAGCGG CGAACTCGAA
GTGCTGATTG TGCGCGAGGT GGTCGAGAAG GTCGAGGACG AGAACCTCCA AATCTCACTC
GCGGACGCCC TCGAACTCGA CCCTGGCGTC GAGATCGGCA TGGAGATGGA GTTCCCGGTC
GACCGTGAGA AGTTCTCCCG GATCGCCCTC CAAGCCGCCA AGCAAACCCT GACGCAAAAG
ATGCGCGAGA CCGAGCGCAA CGTGGTCTAC AACGAGTACA AGGACCGCGA GGGCCAGGTG
CTCACGGCGC AGGTCGTCCG CTCCGACAAC AAAGGCAACT GGTTTGTGGA GCTGGGCGCG
GGTGAGGCGA TTTTGCCGCC CCGCGAGCAG ATCCCGGGTG AAAAGCTGGT GCCCGGCAAC
CGTGTCAAGA TCTACCTCAA GGAAGTCCGC AAGACGCCCA AGGGGCCAAC CATTCTGGCA
AGCCGTGCCG ACGAGCGGCT GCTGGAGTAC CTCCTGCGGC AGGAAATTCC GGAAGTTGCC
AACGGCATCG TCGAGATCAA GGCGATCGCG CGCGAGGCGG GACAGCGCTC CAAGGTGGCG
GTCTACAGCC ATAACCCCAA CGTGGACCCC ATCGGCGCCT GTATCGGGCA CCGTGGCAAC
CGCATTCAGG CTGTGACCGG CGAGCTGGGC CGCGAGCGAG TGGACGTGAT CCTGTGGGAC
GCAAATGCGC GCGACTTCAT CCGCAACGCC CTGTCACCTG CCAAGGTGGG CCTCATCGAG
GTCCGGCCCG ATACCCGTGA GGCGACCGTC ACGGTCACAC CCGATCAGCT CTCGCTGGCC
ATCGGCAAGG GCGGGCAGAA CGTGCGCCTC GCGGCCAAGC TGACCGGCTT TAAAATCGAC
CTGCGCGAAA CCGCCGCCAT TCAGGACCTC GACGCTGCCA TGCAGCAGGC GCTGCAGGAG
GAGCAGGGGA ACACCGGGCC AAGCAGCGCT GCCGCGTCCG CCTTCGACGC GCTCTTCCGG
GACAGCAAGT CGGTGGCGAC CGCCAGCCCG GACGACGAGC AGGAGTAA
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| Protein sequence | MAQPEFNFAD ALREVAQARN INELQLIEAF EQSLAQAYSR NVEPDRRVEV HLDPVSGELE
VLIVREVVEK VEDENLQISL ADALELDPGV EIGMEMEFPV DREKFSRIAL QAAKQTLTQK
MRETERNVVY NEYKDREGQV LTAQVVRSDN KGNWFVELGA GEAILPPREQ IPGEKLVPGN
RVKIYLKEVR KTPKGPTILA SRADERLLEY LLRQEIPEVA NGIVEIKAIA REAGQRSKVA
VYSHNPNVDP IGACIGHRGN RIQAVTGELG RERVDVILWD ANARDFIRNA LSPAKVGLIE
VRPDTREATV TVTPDQLSLA IGKGGQNVRL AAKLTGFKID LRETAAIQDL DAAMQQALQE
EQGNTGPSSA AASAFDALFR DSKSVATASP DDEQE
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