| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0045 |
|---|
| Symbol | |
|---|
| ID | 4058486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 40596 |
|---|
| End bp | 41294 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641229041 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_603517 |
|---|
| Protein GI | 94984153 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2862] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.905028 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGGA CCCGCTCTCA GCCTGTCAGC ACGCCTTCCA AACGCGAATG GTTCAGTGAA
CTGATCGGGC GCACCCGCTT CGTGGTGCTG ATCGCCGTGA TTGCCGTGCT GCTGGTGGCC
TTCAGCCTGT TCCTCCAGGG CACGGTCTTG GCGCTGCAAA CCGTCTACGA AACCTGGCGG
GACATGCTGC AGCCGGGACC TGATGGAACG GTCACAGCTC TGTCGGTCGA GTTTTTGGAA
GTGGTCAGCA CCATGCTCAA GGCCGTGGTG TTCTACATCA TCGGGGTGGG CCTGTATTCC
CTCTTTATCC GGCCGCTGAA CCTCACCTCG TCGCTCGGAG TAGAGAGCCT CTCTGACCTG
GAGCAAAAGG TAGTGTCCAT GATTGTCGTG ATTCTGGGTG TGACCTTTCT GGAACACTTC
ATCCGCTGGA ACAATCCCCA GGAGACGCTG TACTTTGCTG GGGCTTTTGC ACTGGCCGGC
GGAGCGCTCG TGTTCTTCCA GCGCGTTCAC CGGGGTCAAG GCAGTGACCT TCAGCATCCC
GAGGCCAAGC TGCGCGCCCG GCGCGAACTG TTTGAGAACG ACACCGAGCA GCGCGAGATC
CGAGAGGAGG ACGTGCAGCG CGCTGCCCAG GCCACCGAGG CCAAGGCCGA AGGCAGGGTC
AACGCGGACA GCGGCGACGG AGCACTCAAG CGTCCGTGA
|
|---|
| Protein sequence | MTRTRSQPVS TPSKREWFSE LIGRTRFVVL IAVIAVLLVA FSLFLQGTVL ALQTVYETWR
DMLQPGPDGT VTALSVEFLE VVSTMLKAVV FYIIGVGLYS LFIRPLNLTS SLGVESLSDL
EQKVVSMIVV ILGVTFLEHF IRWNNPQETL YFAGAFALAG GALVFFQRVH RGQGSDLQHP
EAKLRARREL FENDTEQREI REEDVQRAAQ ATEAKAEGRV NADSGDGALK RP
|
|---|
| |