Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3890 |
Symbol | |
ID | 4072225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4601857 |
End bp | 4603287 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985914 |
Product | beta-lactamase-like |
Protein accession | YP_592964 |
Protein GI | 94970916 |
COG category | [R] General function prediction only |
COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.493871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTACA TCCAATTCCT CGGCGCCGCG GGCGTCGTCA CCGGTTCCAA ACACCTCGTC AACACCGCTG CCGATGAATC CGGCACCCGC GGTTTCCAAC TGTTGATTGA CTGCGGTCTT TTCCAGGGCC AAAAAGAATG GCGCGAGCGC AACTGGCGCG ACACTCCAAT CCCCGCGCGT GAGATCGATG CCGTCGTCCT CACCCACGCG CATCTCGACC ACACTGGCTG GATCCCGCGC CTGGTGAAAG AAGGTTTCAC CGGCCCCATC TACGCCACAT CGGCCACCGT GGATCTCTGC GGTGTCATCC TGCCTGACAG CGGACACCTC CAGGAAGAAG ATGCGGCGTT CCATAACAAG ATCAAGAGCT CGAAGCACGA CCCGGCTCTG CCGCTCTACA CCATGCAGGA AGCGCTCGAC AGCCTAAAGC TCTTCAAGGC CGTGGACTTC GAGAAGCAGA CCGATGTCTC ACCCGAGCTG AGCTTCCGCT ACGTCCGAGC CGCGCACATC CTCGGCTCCT CGATGGTGGA GCTCACCGTG AAGCAGAACG GCTCCTCGAA GCTCGTACTC TTTTCCGGCG ACATCGGGCG CGTTCGCGAC ACGGAGGTTG CGCCCGGCAA AGTCGTGCGC TCCGGTCCCT ATGAAGGCGA ATCCGCCGAC ATCGTTGTGA TGGAATCCAC CTACGGCAAT CGCGAGCATC CCAAAAACGA CCCGCGCCCC GAGATGGCTA AACTCATTCG CGACACCGTC GGCCGCGGCG GCTCCGTTGT CGTTCCCGCC TTCGCCGTCG AGCGCACGCA GAAGCTGGTC TTCATGGTGA AGCAGATGAT GGAGAACAAC GAGATTCCCA AAGTTCCCGT TCACTGCGAC AGCCCCATGG CGATCAAGGC CGTCGAGATC TTCCTTAAGC ACGAAGAAGA ATTCACCGAC GAAACCAAGC GCCTCATCGA TCAATACGGC AGCCCGCTCA CCTGGCCAGG CTTTTACTTC GACACCACGC AGCAGGAATC GAAGAAGATC AACAACTCGA ACTATCCTCA GATCATCATC TCGTCGAGTG GCATGGCCAC CGGAGGCCGC ATCCAGCATC ACCTCGCGCA GCGCCTCCCG GATCCCAAGA ACCTTGTGCT CTTCATCGGA TTCCAGGCAC CCGGGACACG TGGTCGCCAG ATCAAAGACG GCGAGAAAGA AGTGAAGATT TTCGGCCAGA TCGTTCCCGT CCGCGCCCAG GTCGCCACCC TCGAACAGTT CAGCGACCAT GCCGACACGA GCGAGCTTCT TGAATGGCTA CATACGTTCA AGAAGGCGCC ATCGCAAACC TGGCTCGTCC ACGGCGAGCC CGACGCCGCG CAGAAACTCC GAGACGCGAT GATCAAAGCG CTGCACTGGA ACGTGAACGT AGCGCAGTGG ATGCAAAAAG CCCCGGTATA G
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Protein sequence | MTYIQFLGAA GVVTGSKHLV NTAADESGTR GFQLLIDCGL FQGQKEWRER NWRDTPIPAR EIDAVVLTHA HLDHTGWIPR LVKEGFTGPI YATSATVDLC GVILPDSGHL QEEDAAFHNK IKSSKHDPAL PLYTMQEALD SLKLFKAVDF EKQTDVSPEL SFRYVRAAHI LGSSMVELTV KQNGSSKLVL FSGDIGRVRD TEVAPGKVVR SGPYEGESAD IVVMESTYGN REHPKNDPRP EMAKLIRDTV GRGGSVVVPA FAVERTQKLV FMVKQMMENN EIPKVPVHCD SPMAIKAVEI FLKHEEEFTD ETKRLIDQYG SPLTWPGFYF DTTQQESKKI NNSNYPQIII SSSGMATGGR IQHHLAQRLP DPKNLVLFIG FQAPGTRGRQ IKDGEKEVKI FGQIVPVRAQ VATLEQFSDH ADTSELLEWL HTFKKAPSQT WLVHGEPDAA QKLRDAMIKA LHWNVNVAQW MQKAPV
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