Gene Acid345_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3533 
Symbol 
ID4069264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4180173 
End bp4181090 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content59% 
IMG OID637985556 
ProductABC peptide transporter, inner membrane subunit 
Protein accessionYP_592608 
Protein GI94970560 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCT ACCTCGCGCA GCGCGTGGCC TACATGGTTC CCGTCGTGTG GCTCGTGGTT 
TCGGTGGTGT TCCTGCTGAT CCATCTTGTC CCCGGCGATC CCATTCAGCA GATGCTCGGC
GAAGGCGCGG CCGTAAACGA TCTCCAGGCC GCACGCCACG CTTACGGCCT CGATGTCCCC
ATCGGCAAGC AATATGTGAA TTACTGGAAG GGCGCACTCC ACGGCGATCT CGGTAAATCG
ATTCGTCTGA ATCAGCCTGT CGCCAAGACC ATTGCGCAAG CTTATCCACC GACGATCCTG
CTGACCTTCG CCGCGCTTTT CGTCGCCCTT TGCCTCTCGA TTCCCGCAGG CGTGCACTCT
GCGCTGCATC GCAATCAATG GAGCGATCGC CTGCTGAGTT TCGTCACGCT CCTCGGTCTA
TCGTTTCCAA ACTTTGCGCT TGGGCCGATC CTTATCTTGT TCTTTGCAAT TAAGCTCGGG
TTTCTGCCGG TCTCCGGCAT CGGCACCTTT GAACATCTCG TGCTTCCGGC AATCACCATG
GGCGGCGCGC TGGCCGCGAT CCTTGCGCGC ATGGTGCGGA CCTCAATGCT CGAAGAACTC
AGCCAAGATT ACATCCGTAC CGCGCGCGCC AAAGGCCTGC CCGAACGCAC GGTCGTGTAC
CGCCACGCGC TGCGCAATGC GCTCATCCCC GTCTTAACTG TGGTTGGATT GCAATTCGGA
GCACTGCTCG CCGGCGCTAT CGTCACCGAA ACGATCTTCT CCTGGCCCGG CATCGGCCGC
CTGACCATCA CGGCCATCAA CAACCGCGAC TACTTCTTAG TCGAAGGCTG CATCCTCGCG
ATCGGGTTAA CGTATGTCGC GGTGAATTTT CTGACAGACC TGCTGTATTC CGCGGTGAAC
CCGAGAATTA GGGCGTAA
 
Protein sequence
MLRYLAQRVA YMVPVVWLVV SVVFLLIHLV PGDPIQQMLG EGAAVNDLQA ARHAYGLDVP 
IGKQYVNYWK GALHGDLGKS IRLNQPVAKT IAQAYPPTIL LTFAALFVAL CLSIPAGVHS
ALHRNQWSDR LLSFVTLLGL SFPNFALGPI LILFFAIKLG FLPVSGIGTF EHLVLPAITM
GGALAAILAR MVRTSMLEEL SQDYIRTARA KGLPERTVVY RHALRNALIP VLTVVGLQFG
ALLAGAIVTE TIFSWPGIGR LTITAINNRD YFLVEGCILA IGLTYVAVNF LTDLLYSAVN
PRIRA