| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3531 |
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| Symbol | |
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| ID | 4069262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4177354 |
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| End bp | 4178556 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637985554 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_592606 |
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| Protein GI | 94970558 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.445744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG GCAAGAATAA GAAGAAGAAA TGGATCATCG GCGGAGTCAT CGTATTCGTG
CTGGTGCTCG TAGTGGTTGG CGTTGGTATG GCGACCAGCG GTGGAGCAAA GATTGACCCG
ACCAAGATCG CTGCCGTGGA GAAGGGCGAC CTGGCCAAGA GCGTGGTCGC GACCGGCAAG
GTCGAGCCGA TCACCAAGGT CGAAATCAAG TCGAAGGCCA GCGGCATTGT GAAGAAGTTG
TACGTGGAGT ACGGCGACAA AGTGAAGGCC GGCCAGTTGC TCGCGGAACT CGATAAAGAC
GAAATCATCG CGCAGGTTCG TTCGCAGAAG GCGCAGTTGG AGTCTGCGGA GTCGAACATG
CACGCGGCCG AAGCTGATTA TGAGCGTTCG AAGGTAGATG CAGCGGGCGT AGATATTCCG
ACCTTGCAGC GCGCCTACGA GCGGGCCAAG AGCATGGCCA AAGACGGCGT GGTTTCGCAG
TCGGCACTGG ACGACTCGCA GCGTGCCTAC GAGATGGCAA CGAACAAGCA GAACGTTGCC
CGCGCCCAGG TAACCGTCAA CAAGGCGAAG GAAGCGCAGG CGCAAGCCGA CGTGCAGAAG
GCGCAGGCGA CCCTGGCGCA GTTGAACGAG CAGCTGAGCT ATACCACGAT CGTCGCTCCA
ATTGACGGCA TCGTGCTCTC GCGTGACGTG GAAGTAGGCG ACGCCGTCAG CTCGATCCTG
GTGTTGGGAT CTTCCGCAAC TCTGGTGATG ACGCTTGGCG ACACGAGCGA AGTCTATGTG
AAGGGCAAAG TGGACGAGAG CGACATCGCG AAGGTGTACA TCGGCGAGGC GGCCCGCATC
AAGGTTGAGA GCTTTAAGGA CAAGACCTTC CAGGGCAAGG TGACGAAGAT CTCGCCGATG
GGCGTGGAAA AAGACAACGT CACCACGTTC GAAGTGCGCG TGTCGATCAA CAACCCTGGC
GGCGAACTGA AGGCTGCAAT GACCGCCAAC GCCGAAATCA TCCTCGAAGA GCACAAGAAT
GTGCTGATGA TTCCGGAGGG CGCGATCATC TACGACCGCG AGAAGAAGGC GTCGGTTGAA
ACGCCGGACC CGAAGGCGAA GGACGGCAAG AAGAAGGTCG CGGTACAGAT TGGCATCTCG
AACGGAGCCA AGACCGAAGT GCTTTCCGGG CTCAAAGAAA AAGATCAAGT CGTGCTGCAG
TAG
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| Protein sequence | MANGKNKKKK WIIGGVIVFV LVLVVVGVGM ATSGGAKIDP TKIAAVEKGD LAKSVVATGK
VEPITKVEIK SKASGIVKKL YVEYGDKVKA GQLLAELDKD EIIAQVRSQK AQLESAESNM
HAAEADYERS KVDAAGVDIP TLQRAYERAK SMAKDGVVSQ SALDDSQRAY EMATNKQNVA
RAQVTVNKAK EAQAQADVQK AQATLAQLNE QLSYTTIVAP IDGIVLSRDV EVGDAVSSIL
VLGSSATLVM TLGDTSEVYV KGKVDESDIA KVYIGEAARI KVESFKDKTF QGKVTKISPM
GVEKDNVTTF EVRVSINNPG GELKAAMTAN AEIILEEHKN VLMIPEGAII YDREKKASVE
TPDPKAKDGK KKVAVQIGIS NGAKTEVLSG LKEKDQVVLQ
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