Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2218 |
Symbol | |
ID | 4072963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2636700 |
End bp | 2637632 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637984234 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_591293 |
Protein GI | 94969245 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.446862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.810917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCGG TCACACAGCC GCTTGCGGTT CCCCGCCCGG GTGTTGCGTC GCTTCTCCGC GACTACTCTG AATTGACCAA GGCCCGCGTC ACCACGCTCA TCGTGATGAC CGCCTGGACC GGCGCATTCT TCGGCGCGGC CAAATCAGGA TTGCCGCTGG TGAGTTGGAC GCTGTTCCAT GCGCTGCTCG GCATCGGTCT CGTCTCCGGC GGTACAGCCG CGATGAACGA AGTGATCGAG CGTGAGTCCG ACGCGCGCAT GCGCCGCACC GCCATCCGTC CGCTAGTGAC CGGCAGCATG AGCCTGGGCC ATGGCATGGT CGTCTCGCTG GTAATGATGA TCGGCGGCGC CGGCTATCTT GGCCTCATGA CCAATTGGCT CACCGCTGCA CTCGCGCTGA TGACCAGCGT GGTCTACCTG ATGGCGTATA CGCCGTTGAA GAAGATCCAC CCCATCTGCA CCACCATCGG CGCCTTCCCT GGCGCGATGC CGCCGGTGCT CGGCTGGACC GCCATCCGCG GGCATCTCGG GTGGGAAGCA GTTGCGTTGT TCGCCATTCT GTTCTTCTGG CAGTTCCCGC ACTTCCATTC CATCGCATGG CTCTACCGTG ACGACTACGC GAATGCGGGA ATCCGCATGC TGCCCGTGGT CGAACGCGAT GGCCGCTCTA CGGCGCGCGA GATCGTGATC TACGCAGCCT TCCTGTTGCC GATCACCCTG ACACCGTTCC TGCTGCGTTT TGCCGGAAGA ATCTACTTCC TGGCGGCGCT GGTGCTTGGC AGCATGCTTT TCTGGGTGAG TCTCCGCATG TTCACCATGA ACCTGGCGCC CAGCTCACCG CATTCCAAGA AATACGCGCG ACAGTTGCTG CTGGCGTCCG TGACGTACCT GCCACTGCTA TTCGCGGTGA TGATGCTGGA TCGGACGATC TAA
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Protein sequence | MSSVTQPLAV PRPGVASLLR DYSELTKARV TTLIVMTAWT GAFFGAAKSG LPLVSWTLFH ALLGIGLVSG GTAAMNEVIE RESDARMRRT AIRPLVTGSM SLGHGMVVSL VMMIGGAGYL GLMTNWLTAA LALMTSVVYL MAYTPLKKIH PICTTIGAFP GAMPPVLGWT AIRGHLGWEA VALFAILFFW QFPHFHSIAW LYRDDYANAG IRMLPVVERD GRSTAREIVI YAAFLLPITL TPFLLRFAGR IYFLAALVLG SMLFWVSLRM FTMNLAPSSP HSKKYARQLL LASVTYLPLL FAVMMLDRTI
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