Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2002 |
Symbol | |
ID | 4070908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2398731 |
End bp | 2399924 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637984016 |
Product | hypothetical protein |
Protein accession | YP_591077 |
Protein GI | 94969029 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4966] Tfp pilus assembly protein PilW |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00963424 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGC GCGGCGCAAA AGGTTTCACG TTGGTCGAAC TGCTGGTGGC AATCAGCCTT GGATTGCTGG TTACCGGTGC AGCAGTCGCT GTCTACAAAC AGGCAGTAGA CAGTACGACC TACCTCACGC AGCGAACTGT CGTCCAAGGC AATGCTCGGG CTGCGATGAA TACGATCTCG CAGGACCTGA ACTTTGCCGG GTATGGGCTA CCAATCGGCG GAATTCCAGT GCCGACGGCC GCGCTCTTTA GCTGCGCTAC TGGAAGCGCC GCCGCGTCCT GGGCATATAG CTGCCCGACG ACTGCGCCAT CGTTCCCGGT TATCTCGGGC GCCGCGACCA TGTCCGGCAT CACGCCGATG TATCAGGCCG GCCCGACGAT CAACGGAAAC GCAACTGACC AGATGGCAAT GGCTTATGTT GACAGCTCTC CAAATTTTTC CAACAACACT TGCGGGGTTT CTACGCAATG TGGGTTTGAC GCATTCCCAT TGACGCAGGC GTCGGTGTCT GGCAGTACAA CGACGCTTTA CTTCAACGGT TCGACTACTC CGGCGCCAAA CGATACCAAG TGGGGTTTGA AGGTTGGGGA CATCCTGCTG GTCTCGAACT CCACCGGCCA GGCCGTAGGA GAAGTCACGA GCGTAACCTC GGGCAATGTT GTGCTCGCTG CAAGTGATCC GATGAAGTTG AATCAGGCGT TCGGGACAGG CGGATCGGTG CCCAATGTCC TCGGATTCAG TTCAGGTATC CAAGCTTACA ACAACGGAGC AGGCCCCCTG CAGTCAACAA ACGTGAAGCG TCTGTACATC GTGACTTACT ACGTAGCCAC AGATCCTTTG GCGCAGGCGG TGGGAACAAC TGGAAATCCG ACGCGCCTGT ACCGGATGGT GAACGGCGAT TCCAATACCA ATCCCCCGGT TCCAGTGGCA GAACAGATTT CCAATCTGAC CTTCAGCTAC AACATGTTCG ATTCTGTCTG TGGCGGTTCA CAGTCCGCCA ACCAACGCAA TCCGACAACG AACCAAATCG GCTTGATCAA GACGATCAAT GCCAGCATTT TTGCGGCGAG CACACTCAAC ACGACAGCTA TTCCCGGCCA GGCCATCCAG CAGATTCCGA TGACCACCAC AGTTTCGCCA AGGAACCTCA GTTATTTCGA CTCGTATTCT TCGACGCCGC AAGGCAGTTG CTAA
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Protein sequence | MKMRGAKGFT LVELLVAISL GLLVTGAAVA VYKQAVDSTT YLTQRTVVQG NARAAMNTIS QDLNFAGYGL PIGGIPVPTA ALFSCATGSA AASWAYSCPT TAPSFPVISG AATMSGITPM YQAGPTINGN ATDQMAMAYV DSSPNFSNNT CGVSTQCGFD AFPLTQASVS GSTTTLYFNG STTPAPNDTK WGLKVGDILL VSNSTGQAVG EVTSVTSGNV VLAASDPMKL NQAFGTGGSV PNVLGFSSGI QAYNNGAGPL QSTNVKRLYI VTYYVATDPL AQAVGTTGNP TRLYRMVNGD SNTNPPVPVA EQISNLTFSY NMFDSVCGGS QSANQRNPTT NQIGLIKTIN ASIFAASTLN TTAIPGQAIQ QIPMTTTVSP RNLSYFDSYS STPQGSC
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