Gene Acid345_1501 details

Gene Information

• Locus tag: Acid345_1501
• ID: 4069248
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: +
• Start bp: 1827378
• End bp: 1830749
• Gene Length: 3372 bp
• Protein Length: 1123 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637983510
• Product: TonB-dependent receptor
• Protein accession: YP_590577
• Protein GI: 94968529

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.175276
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.273267
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGAAGT CTTACCTGGC GATTCTGCTC GCCACGGTAT TGGTTTTGTT GTGCGCGTTT 
CCCGCCTTAG CACAATCCAA TACAGCAAAG TTGACCGGAA CAGTCGCAGA CGCGCAGGGT 
GCAGTCGTCC CCGGCGTCAG CATTACTGTC ACCAGCTCGA AAGGTCGTGC AACTACGGTC 
CAGAGCAATG CTTCCGGCTT CTACACGATT GCTGCGTTGG ATCCCGATAC CTATAACGTG 
GATGTGAAGC AGTCCGGATT CAAACCCATC ACGCAAAAGA TCACGCTTCA GACTGCCCAG 
CAGGCGGAAC TGAACTTCAC CATGCAATTA GGTTCGACCT CAGAGACCGT TGAGGTTACC 
AGCGATGTTC CGCTCGTCGA CGCCATCAGC TCGAACGTGA GCGCCGTCAT CGTCGGCCGC 
CAGATTACCG AGCTCCCGCT CAACGGCAAC AACTTCACGC AGCTTGCAAC CCTCGTCCCG 
GGCGTCACTC GCGGTATGCC GGCCAATCAA CAGTCTGGAG AGGGCAACCA GGCCGAAACA 
TTCCGCTATG CGGGCAACGG CGGTTCCGCC ATCTCCGTAA ACGGTCTTCG TCAGCAGGCG 
AACAACTTCC TGCTCGATGG TTTCGACAAC AACGAGAGCC TGGTGAACAC GATTGTGTTC 
TTCCCGCCGA CCGAGGCGAT CCAGGAATTC CGCGTTGACA CCAGCGTTGC GCCGGCAGAA 
TTCGGCCGCG CCGGCGGTGG CATCGTCAAC TCGTCTATCA AGTCAGGCAC CAACAGCTGG 
CACGGCTCTG CATTCGACTA TCTTCGCAAC AGCGTCCTGG ATGCGAAGAC CTACGCATTG 
GGTCCGAATG ACCCGAAGCC CCCCTTCCGC CGCAACCAGT TTGGCGGCGC AATTGGCGGC 
GCGATCATCA AGAACAAGCT TTTCATTTTC GGTGATTATC AGGGCCTTCG GCAGGCGCAG 
CCGGCCAGTC TCGACTTCGC GACTGTCCCG ACCGACATGA TGCGCAGTGG CGATTTCTCC 
GAATTGTTGG GACTGCAACG CGTGGACGGA ACGGCGGTAG CGCCCATCCA AATTCGCCAT 
GCGGGCGCCA ACAGTTCCGC CGATTACGTG AACTACGTTG GGAATATCAT CCCCAGCGCT 
GACTTCGTTG GCGCCGGCCA AGCTTATTTG AACGCCTATC CGGAGCCGAA TGTCTCCGCC 
ACGAACACAC ACTGCGGTCT GGTCTCGACC CTCGATGGCC TCTGCCTGCA GCAGAACTAC 
ATGGTCCAGC GGCAGCAGAT CCAGAACTTC GATGATTTCG ACATCCGTGC CGACTATGTC 
CTTCGCACCC AGGACACGAT GTTCCTGCGC TACAGCTATG GGCACGAAAC CGACGTCACG 
ACGTCGCGCC TGCCTGCACT GCCCGCCGGA TTTGGTTCCG GCGATCAGTT CAGTATGCCT 
CGCTCCTGGG CATTCGGTGA AACCCACACT TTCTCCCCAA ACATCCTGAA CGAGTTCCGC 
TTCGGATGGA TTCGCGCGAA CCTCGGCTAT CTGCCGCCGT TCGACGACCA GGCCTTGTCG 
GCAAATCTCG GAATTCCGAA CGCCAACACT TCGTCTCTGC TTGGAGGCGG CGCCCTTATC 
GGTGGTTACA ACGGTCAGCT GGAATACACC GGGGACTACG GTCCGTACCA GGTTCCGGAA 
AACACTTATC AACTCGCCGA CAATGTCAGC TGGATCAAGG GTCATCACAG CTTCAAGTTC 
GGCGCGAACC TAATGTGGCG ACAAGTCAAC CTCTTCCGTC CCAAGGCGGG CAAGGGTTAC 
TTCTTCATCT CCGGTAACGG TGGCGATGCC TTCTCGACCG GATACGAAGT CTCCGACGTT 
CTCGCCGGTT TCATGAACAA CTACCAGGTT GGTCCGGCAC TTGGATTCGC TGGGACCCGC 
AGCTGGGAAA ACGGCATTTT CGCTCAGGAC GATTGGCGCA TTACCAATCG GCTGACGTTG 
AACCTCGGCT TCCGCTGGGA TGTGCTCACA TGGCCCACCG AAGTCCACAA CCAGATGTCG 
AACTTCGACC TGAACCCCGG CAGCGGTACC TATGGACAGG TGGTTCTGCC TGGAACCCAC 
GGCTACAACG ATTCGTTCGT TCCGACCGAT TGGCATAACT TCGCTCCTCG CGTCGGTTTT 
GCCTACAACC TGTTTGGCAA CGGTAAGTCC GTGGTGCGCG GCGGTTATGG AATGTTCTAT 
TTCGTAGACC GTGGCGGCAT CGACAACCAG ATGGCGCAGA ACGCTCCGTT TGCGGGCGTC 
TCGCAATACA ACTACACCAA CGGCTATCGC TTCACGCTCG GCGGCCAGGC TCCACTGAAC 
TCAGTGGATC CGACGCAAGG CGGCGCGGTC GGCATGCCGG ACAAGAACGA TTTCAACATC 
GACTTCACCA ATCCGGCGAA CCTCTCGATG GTGTCGTACC TTAACCGCAA CGTACCGGCC 
AGTGTGCAGG AGTGGAACCT CCAGTTCGAA CAGGAACTTG GCGTCAACAC CTCCTTCATG 
CTCGCTTACG TGGGCAACAA GGGCACGCAT CTTACCTCGT ACCACGACTT CAACCGCCAG 
TTCTACAACC AGGCCAATGG CGACAAGAAC TTCCCAGCCA TGGGCAGCCT CACCGTTCAC 
GATACTAGCG GCAACTCAAA CTACAACTCG TTGCAGGCGC AGTTGACTCG CCGCATGACC 
AAGGGCCTGC AGTTCAACGC TTCGTACACC TGGGCCCACG CAATCGACGA TTCCCAGGGC 
GCATTCGACG CCAACAATGG CGTTGTCGAT TACTTCAACC TGGCGCATGA GCGCGCGAAC 
TCGTTGCTCG ACTTCCGTCA ACGCTTCGTG TTCAACGCTC TGTACGAGCT GCCTTTCGGC 
CACGGACGGC AGTGGGGCAA TAGCTGGAAC GGCGTCACCA ACGCGGTCCT TGGTGGATGG 
CAGTTCAACC CGATCCTGAC GCTCAGCAGC GGATCACCGT TCGACCTCGG TGGAATCGGT 
AACCCGCAGA CGCGTCCTGA CCTGGTCGGC CAGCTGCATC AGTTGAACAG CGTGAACGGC 
ATGTGGTTCG ACACCAGCGC GTTCGCGGTT CCCGCCTCGA ACGGCACCGG CGTCTTCCTC 
GCGCCTGGCA CCGCTCCTCG CAACCCGTTC ACCGGACCGG GAACCGAGAT CTTCGACTTC 
TCTGTCCAGA AGACGTTCGC GATCACTGAA CGCGTCCGGA CCGAGTTCAC GTCGCAGTTC 
TTCAACGCCT TCAACACCCC GCAATTCGCA CAGCCGGATG GCAACTTCTA CGATGGCAAC 
TTCGGTCGTG TGACCAACAC TCGCTTGAAC AGCGAACGCC AGGTCCAGTT CGGACTTCGC 
GTTCTCTTCT AA 

 

Protein sequence

MKKSYLAILL ATVLVLLCAF PALAQSNTAK LTGTVADAQG AVVPGVSITV TSSKGRATTV 
QSNASGFYTI AALDPDTYNV DVKQSGFKPI TQKITLQTAQ QAELNFTMQL GSTSETVEVT 
SDVPLVDAIS SNVSAVIVGR QITELPLNGN NFTQLATLVP GVTRGMPANQ QSGEGNQAET 
FRYAGNGGSA ISVNGLRQQA NNFLLDGFDN NESLVNTIVF FPPTEAIQEF RVDTSVAPAE 
FGRAGGGIVN SSIKSGTNSW HGSAFDYLRN SVLDAKTYAL GPNDPKPPFR RNQFGGAIGG 
AIIKNKLFIF GDYQGLRQAQ PASLDFATVP TDMMRSGDFS ELLGLQRVDG TAVAPIQIRH 
AGANSSADYV NYVGNIIPSA DFVGAGQAYL NAYPEPNVSA TNTHCGLVST LDGLCLQQNY 
MVQRQQIQNF DDFDIRADYV LRTQDTMFLR YSYGHETDVT TSRLPALPAG FGSGDQFSMP 
RSWAFGETHT FSPNILNEFR FGWIRANLGY LPPFDDQALS ANLGIPNANT SSLLGGGALI 
GGYNGQLEYT GDYGPYQVPE NTYQLADNVS WIKGHHSFKF GANLMWRQVN LFRPKAGKGY 
FFISGNGGDA FSTGYEVSDV LAGFMNNYQV GPALGFAGTR SWENGIFAQD DWRITNRLTL 
NLGFRWDVLT WPTEVHNQMS NFDLNPGSGT YGQVVLPGTH GYNDSFVPTD WHNFAPRVGF 
AYNLFGNGKS VVRGGYGMFY FVDRGGIDNQ MAQNAPFAGV SQYNYTNGYR FTLGGQAPLN 
SVDPTQGGAV GMPDKNDFNI DFTNPANLSM VSYLNRNVPA SVQEWNLQFE QELGVNTSFM 
LAYVGNKGTH LTSYHDFNRQ FYNQANGDKN FPAMGSLTVH DTSGNSNYNS LQAQLTRRMT 
KGLQFNASYT WAHAIDDSQG AFDANNGVVD YFNLAHERAN SLLDFRQRFV FNALYELPFG 
HGRQWGNSWN GVTNAVLGGW QFNPILTLSS GSPFDLGGIG NPQTRPDLVG QLHQLNSVNG 
MWFDTSAFAV PASNGTGVFL APGTAPRNPF TGPGTEIFDF SVQKTFAITE RVRTEFTSQF 
FNAFNTPQFA QPDGNFYDGN FGRVTNTRLN SERQVQFGLR VLF