| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1251 |
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| Symbol | rpsM |
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| ID | 4069826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 1525894 |
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| End bp | 1526277 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637983260 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_590327 |
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| Protein GI | 94968279 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00631403 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.17118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TTGCAGGCGT GGATCTTCCG CGCAACAAGT ACATCAACAT CGCGCTGACG
TATATCTTCG GCATCGGCAA CTCGCGCGCC AAGGCCATCC TGGCGGAAGC GAACGTGGAA
GCGAACCGCA AGGTTAGCGA CCTGAACGAA GAAGAAGTCA ACCGCATCCG TACGGCGATC
GAAAACGGCA GCTCGGTCGA AGGCGACCTC CGCAAGGACG TCTCGATGCA TATCAAGCGG
CTGATCGAAA TCGGTTCTTA CCGCGGCTAT CGTCATCGCC GCAGCCTGCC GGTCCGCGGC
CAGCGCACCC ACACTAATGC GCGCACCCGC AAAGGTCCGC GTAAGGGCAC CGTGGCGAAC
AAGAAGAAAG CAACCGCTAA GTAA
|
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| Protein sequence | MARIAGVDLP RNKYINIALT YIFGIGNSRA KAILAEANVE ANRKVSDLNE EEVNRIRTAI
ENGSSVEGDL RKDVSMHIKR LIEIGSYRGY RHRRSLPVRG QRTHTNARTR KGPRKGTVAN
KKKATAK
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