Gene Acid345_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0078 
Symbol 
ID4069702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp79589 
End bp80269 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content61% 
IMG OID637982078 
ProductTENA/THI-4 protein 
Protein accessionYP_589157 
Protein GI94967109 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACCC AACAACTTCT GCACGAACTC GACGCGCATA TCTCGAAATA CGATCTGCTT 
TGCCATCCTT ATTACAAGGC GTGGAGCGCC GGAACGCTCA CTCGTGAAGA TCTCGCCGCT
TATGCGGGCG ATTACTACCA TCACGTCGCG GCATTTCCCG CGTACCTGAG CGCGTTCCAC
TCGCGTCTGG AAGATGGCGA AACCCGTCGC ACCGTCCTTC GCAATTTGGC GGACGAAGAA
ATCTCGGGCC GTGCTCACAG CGACATCTGG CTCGACTTCG CCGCCGGCAT GGGTGCGGAT
TGCGACACCG TCCGCTCGTC GCAGCCAATG GATTCGGTCG CCAACGCGAT CGCCTGGTTC
CGCAACATCG CCGCCACCGG CACCCGCGCC GAAGCGCTTG CCGCGTTCTA TGCGTACGAG
TCGCAGGTGC CGCGCGTGGC GGAAGAAAAG TCAAAGGGTT TGAAGGAACG TTACGGGGCC
GACCGCAAAA CCTGCGGCTA CTTCGACCTG CACAAGTACG CCGACGTCGA ACACTCCCGC
GTGTGGGGCG ACCTGCTGGC GCAGGAGTTA GAAGCGCACC CCGAACAGCG CGAAGCTGCT
CTGGCCGCGT CCGAACAAGC CGCAAAGGTT TTGTGGGAAG TGTTAGACGG CATGGAAGCG
CGCCGCATGA CAGTGGTGTA G
 
Protein sequence
METQQLLHEL DAHISKYDLL CHPYYKAWSA GTLTREDLAA YAGDYYHHVA AFPAYLSAFH 
SRLEDGETRR TVLRNLADEE ISGRAHSDIW LDFAAGMGAD CDTVRSSQPM DSVANAIAWF
RNIAATGTRA EALAAFYAYE SQVPRVAEEK SKGLKERYGA DRKTCGYFDL HKYADVEHSR
VWGDLLAQEL EAHPEQREAA LAASEQAAKV LWEVLDGMEA RRMTVV