Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0078 |
Symbol | |
ID | 4069702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 79589 |
End bp | 80269 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637982078 |
Product | TENA/THI-4 protein |
Protein accession | YP_589157 |
Protein GI | 94967109 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACCC AACAACTTCT GCACGAACTC GACGCGCATA TCTCGAAATA CGATCTGCTT TGCCATCCTT ATTACAAGGC GTGGAGCGCC GGAACGCTCA CTCGTGAAGA TCTCGCCGCT TATGCGGGCG ATTACTACCA TCACGTCGCG GCATTTCCCG CGTACCTGAG CGCGTTCCAC TCGCGTCTGG AAGATGGCGA AACCCGTCGC ACCGTCCTTC GCAATTTGGC GGACGAAGAA ATCTCGGGCC GTGCTCACAG CGACATCTGG CTCGACTTCG CCGCCGGCAT GGGTGCGGAT TGCGACACCG TCCGCTCGTC GCAGCCAATG GATTCGGTCG CCAACGCGAT CGCCTGGTTC CGCAACATCG CCGCCACCGG CACCCGCGCC GAAGCGCTTG CCGCGTTCTA TGCGTACGAG TCGCAGGTGC CGCGCGTGGC GGAAGAAAAG TCAAAGGGTT TGAAGGAACG TTACGGGGCC GACCGCAAAA CCTGCGGCTA CTTCGACCTG CACAAGTACG CCGACGTCGA ACACTCCCGC GTGTGGGGCG ACCTGCTGGC GCAGGAGTTA GAAGCGCACC CCGAACAGCG CGAAGCTGCT CTGGCCGCGT CCGAACAAGC CGCAAAGGTT TTGTGGGAAG TGTTAGACGG CATGGAAGCG CGCCGCATGA CAGTGGTGTA G
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Protein sequence | METQQLLHEL DAHISKYDLL CHPYYKAWSA GTLTREDLAA YAGDYYHHVA AFPAYLSAFH SRLEDGETRR TVLRNLADEE ISGRAHSDIW LDFAAGMGAD CDTVRSSQPM DSVANAIAWF RNIAATGTRA EALAAFYAYE SQVPRVAEEK SKGLKERYGA DRKTCGYFDL HKYADVEHSR VWGDLLAQEL EAHPEQREAA LAASEQAAKV LWEVLDGMEA RRMTVV
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