Gene Rmet_5788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5788 
Symbol 
ID4042652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2545298 
End bp2545945 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content62% 
IMG OID637981207 
ProductDSBA oxidoreductase 
Protein accessionYP_587916 
Protein GI94314707 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0487063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG CACTCAGGAT CGATTTTGTT TCCGATATCG CATGCCCATG GTGCGCCATT 
GGCCTGACGT CGCTCAAGCA GGCGCTGGAG CGTCTCGGGG ACGAAGTGGA AGCCGAGATC
GTCGTGCATC CGTTCGAACT GAATCCGGAC ATGCCGCCGG AAGGCCGCAC CATCCTCGAC
TACGTCAGCA CGAAGTACGG CAGCACCGCC GAGCAGCTTG CCGAGCGCCA GGTACAGATC
CGCGAGCGCG GCGAGGCGGT CGGATTCGAG TTTGGCCCCC GGACGCATAT CTACAACACG
TTCGACGCGC ATCGCGTGTT GCAGTGGGCC GGCACGCAGG GCAAGAAGCT GCCGCTCAAG
CTGGCCTTGC TGAAGGCCTA TCACGGCGCG GGCAAGGACC CGAGCAATCA CGACGTGATT
GTGGAGGCCG CGCAATCGGC GGGTCTCGAT GGCGCGGAGG CGCGCCGCAT TCTGGAAAGC
GATGCCTATG CCGATGAAGT GCGCGCTGAG GTGGCGCAGT TCCAGTCGAT GGGTATCAAC
TCGGTGCCAT CGGTCATTTT CGACAACCGC TACCTCCTCA CGGGCGGGCA ACCGCCGGAA
GCCTTCGAGC AGGTGATTCG CGAAGTGCTG GAAAAACGGC AGTCATGA
 
Protein sequence
MTQALRIDFV SDIACPWCAI GLTSLKQALE RLGDEVEAEI VVHPFELNPD MPPEGRTILD 
YVSTKYGSTA EQLAERQVQI RERGEAVGFE FGPRTHIYNT FDAHRVLQWA GTQGKKLPLK
LALLKAYHGA GKDPSNHDVI VEAAQSAGLD GAEARRILES DAYADEVRAE VAQFQSMGIN
SVPSVIFDNR YLLTGGQPPE AFEQVIREVL EKRQS