Gene Rmet_5708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5708 
Symbol 
ID4042572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2465647 
End bp2466336 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content61% 
IMG OID637981127 
Producthypothetical protein 
Protein accessionYP_587836 
Protein GI94314627 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTACC GCGGCGGCGT CAGGCACGCC GCCGCGTGTC CCGAACCTAA CAGAATCCGA 
ATCCAAGAAA TGAAAGCCAA ATCTACCTGG ATCGCTGTCG CGACCGTACT GGTCGCCGCT
GCAGCACTGC AGGGGTGCTC GACCACGTCG AGTCGCCTCT CGGATGACGG TCAGTCTGAC
CAAATCGTAT TTCCGGACCC GGCTTCGTCG TGGCCGAAGG ACGGTACGTT CCCGAATATC
GACAACCTGC GCATGCTGGC ACCCGGCATG ACGAAGTCTC AGCGCTATCC GCTGCTGGAC
CGGCCGCATT TCAATGAAGG CTTCCTTGGC GTGCGCGAAT GGGACTACCT GTTCAACTTC
CGCACGGGCC GCGCCGCGCC GAACGATGTC GTCCAGTGCC AGATGAAGGT CGTTTTCGAC
AAGAACGAGA AGACACGTGC GTACTACTGG AAGCCGGAAT CCTGTGCTGG TTTCCTGAAC
AAGCCGGCTC CTGAAGTGCA ACGAGTGGTT CTGCCGCCGG TTGTCGCCAA CGTGCCAACG
GTGCTGCGCA ACGCAACGCT GTTAGGCGAT ACGCTCTTCC GGTTCAACGG CTCGGGCCCA
GGTGATCTGA CCAACGACGG CCGCAGGCGG AGGGTCGCGG CAAGTCTGAA TCGGGTACGC
AGTGCGGTAC CCTGTCGCGC GCGAAGTTGA
 
Protein sequence
MVYRGGVRHA AACPEPNRIR IQEMKAKSTW IAVATVLVAA AALQGCSTTS SRLSDDGQSD 
QIVFPDPASS WPKDGTFPNI DNLRMLAPGM TKSQRYPLLD RPHFNEGFLG VREWDYLFNF
RTGRAAPNDV VQCQMKVVFD KNEKTRAYYW KPESCAGFLN KPAPEVQRVV LPPVVANVPT
VLRNATLLGD TLFRFNGSGP GDLTNDGRRR RVAASLNRVR SAVPCRARS