| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5593 |
|---|
| Symbol | |
|---|
| ID | 4042457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 2347707 |
|---|
| End bp | 2348408 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637981012 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_587721 |
|---|
| Protein GI | 94314512 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.531399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGAC ACAGGCCTGC GGCCGAAGGC GGTTACCAGC GTGGCGAAGA GACTCGTGCC
CGTATCATCG ATGCGGCGCT GCGGCTGTTC GGCACACATG GCTTTGACGG CGCTTCCACC
CGCGACATCG CGCGCGAAGC CGGGGTGAAC GCCCCGGCAC TCCAGTACTA CTTCGATAAC
AAGGAAGGGG TCTACCTGGC ATGCATCGAC TACTTCGTCG AGCGGGTGTG GTCGCTGCTG
GAGGAAGTTG TGGGCCGGGC GGAAGCCGTG GTGGCCCGGG AAGACGCCAG TGACGCAGAA
CTGATCGACG CCTACCTGGC GCTGCAGGCG CGCTTCATGG CCTTTCTATA TGAGGGCCCC
GACACCGAGC ACTGGCGTCA GTTCATGGCG CGTGAACGTG CGGGACTCGG CCCCCCGGCG
GCATTCGACC GCTTCGATGC CGGCATCAAC CACCGGCTGT TCTCGCTGAC CACGCATATC
GTTGGGCGCC TGACCGGGCA GCCGGCCACG GCGGAATCCA CACGTATCCG CACCATCGCC
ATCGACAGCC AGGTGGCATC GTTCAAGGTG ATGCGGCGTC ATATTCTCAA GGCGCTGAAC
TGGCAGGGCT ATGGTGAAGC CGAGACGCAA CGCGTGCAGG ATGTGATGCA CGACCAGACA
CGGACCCTGC TCGAGGGCTT GGTCGCCCAA CGCGACAGGT GA
|
|---|
| Protein sequence | MARHRPAAEG GYQRGEETRA RIIDAALRLF GTHGFDGAST RDIAREAGVN APALQYYFDN
KEGVYLACID YFVERVWSLL EEVVGRAEAV VAREDASDAE LIDAYLALQA RFMAFLYEGP
DTEHWRQFMA RERAGLGPPA AFDRFDAGIN HRLFSLTTHI VGRLTGQPAT AESTRIRTIA
IDSQVASFKV MRRHILKALN WQGYGEAETQ RVQDVMHDQT RTLLEGLVAQ RDR
|
|---|
| |