Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5446 |
Symbol | |
ID | 4042307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2196627 |
End bp | 2198081 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637980864 |
Product | putative MFS superfamily transport protein |
Protein accession | YP_587574 |
Protein GI | 94314365 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAACCT CTGCCATCAA GATACGTGGC ATCGATGATG TCATCGCCTT CATAGATTCC TGTCCAGGCA TTCGCGGCCG CGCCGGCGTC ATCTGGTGGC TGGCACTGGG CGGACTGTTC CTCGACGCAT TCTCCAATTC CGCACTGAGC GCGGGCCTAG GGCCCATGAC GCGCGACCTG AAGCTGGAAC CGGCGCAGGT GGCATTGCTG ACGTCGTTCG CTTCGTGGGT GGCCATCGCC TTCAATCCGC TGGGTGGCTG GATGGCTGAC CGCTGGGGCC GTGTCAAACC GCTGATCCTG GCCAAGGTCT TTGCCGTCGT GGGTGCCTTG CTGGTGGTAT TCGCGCCCGA TTTCAACGCG ATTCTCGTGG GACGTTTCTT CGTCGGTGCC GCGTACGGTA TCGACTTCGC CATTGCCATG GCGGTATTGG CGGAGTTCAC GCCCGTGAAG CTCAAGAGCC GTCTCAATAC CTGGCAGGGC ATGTGGTACA CGGCTGTTTG CCTGAACCTG CTGCTCGCGT TGTTGTTTTA CTCGTGGCAA GTCGGTGACA CGATCTGGCG TTACTCGGTG GCGGCCACGG CTGTGTTTGG CGTCGGCATC CTGATCTTGC AAGTACTGTT CCTGGTGGAA AGCCCGACAT GGCTGGCGCG CAAGGAGCGC CTCGAAGCCG CCGCGCAGGC CATGACACGC ATCTACGGTC GTCCGTTCGA AGCTGCGCCA CTGGCCGAGC GCGTTCCGGT GACCAACATG GCACGCCGCG GTCTCGCCAA CGTGCTGCTG ATCTTCCGTG GCATCTATTT GCCCCGCACG ATTCTGGCGG CCACCGTGCA GATCGGTCAG TCGATCCAGT ACTTCGGCAT TGGCTGGTAT CTGCCGCTGA TCAGCGCGGC GCTGTTCGGC AAGGACTTTG TCTATGCCAC GATTGGCGCG CTGGTGTTCA ATGTGTGTGG CATCTTCGGT GGCTTCCTGT CACCGGTGAT CGGCCGCAAG CTCGGCCTGC GCCGTGCTTC CGCGTACGGC TTCGCGGCGG TGTTCGTGAT GCTGCTGATT CTTGGCCTGT TCAACGGCAA GATGCCCACA TGGGTGGCCG TGGTCGTGCC GTCGCTGTTC ATCCTGTTCC ACTCGGGCGG CCCTGGCGCC AATGGCAAGA GCTTGTCGTC GCTGTCATTC CGCAGCGAAC TGCGCGCGGG CGCCAACGGC GTTATCGGCG CGCTGGGTGC CATCGGAGCC GCGCTGGGCC TGCTGGTATT CCCGCTGTTT CGCGCGCGCT ACGGGCTCGA AACCACTTTC CTGATTCTCT CCGTCGTGCC GCTGGTGGCC AGCATTATCT GCTTCCTCAT TCGCTGGGAC CCCACGCGCA CGGCCATTCA TCCCGATAAC GAAGCCGATG CGCCGCAGTT CCGCAGCGAT GCACGCGACG GCGCCGGCTT CATGCATCCC GCTACAGAGA AGTAA
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Protein sequence | MQTSAIKIRG IDDVIAFIDS CPGIRGRAGV IWWLALGGLF LDAFSNSALS AGLGPMTRDL KLEPAQVALL TSFASWVAIA FNPLGGWMAD RWGRVKPLIL AKVFAVVGAL LVVFAPDFNA ILVGRFFVGA AYGIDFAIAM AVLAEFTPVK LKSRLNTWQG MWYTAVCLNL LLALLFYSWQ VGDTIWRYSV AATAVFGVGI LILQVLFLVE SPTWLARKER LEAAAQAMTR IYGRPFEAAP LAERVPVTNM ARRGLANVLL IFRGIYLPRT ILAATVQIGQ SIQYFGIGWY LPLISAALFG KDFVYATIGA LVFNVCGIFG GFLSPVIGRK LGLRRASAYG FAAVFVMLLI LGLFNGKMPT WVAVVVPSLF ILFHSGGPGA NGKSLSSLSF RSELRAGANG VIGALGAIGA ALGLLVFPLF RARYGLETTF LILSVVPLVA SIICFLIRWD PTRTAIHPDN EADAPQFRSD ARDGAGFMHP ATEK
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