| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5438 |
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| Symbol | |
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| ID | 4042299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2186771 |
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| End bp | 2188318 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980856 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_587566 |
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| Protein GI | 94314357 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.427259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATCTGA CACAGGCTCT GCACAAGGCA TTCCGCGAAA ACCCGTCTGG CGTCGCGACG
ATTTTTGCGC AACGCAGCAC GACGTTCTCC CAGCTCATCG ACCGGGTTGC AAGACTGGCC
AGCGCCTTGC GTGGCCAGGG CGTTGCTGCG GGCGACCGGG TCGCCATGCT GGCGCTCAAC
TCCGACCGCT ACGTCGAGTA CATCTTCGGC ACGCTCTGGG CCGGCGCGGC GCTGAACCCC
GTCAACACCC GGTGGAGCGT CGCGGAAATC GCCTACTCGA TGGAGGATTG CGGCACCAGC
GTGCTGCTCG TGGATGACAA CTTCCTGGAT CTGATCGGGC CACTGCGCGA GCGTTGCCCC
TGCATCCAGA CCGTCATCTA TTGCGGCGAC GCCGAGACCC CGGCAGGCAT GATCGACTAC
GAGCAACTGG TGCGGTCGAG CGCGCCGATT GCCGACAGCC TGCGCAGTGG CCACGATCTT
GCCGCAGTGC TCTACACCGG CGGCACCACC GGCGCACCCA AGGGCGTCAT GCTGTCGCAC
GCCAATATCG CCAGCAACGT GCTGTCGTCA CTGGCAGCGG CATCGCGCCC GCCAGTGACG
TCGATCCTGC AGATGGCACC GATGTTCCAT ATCGCGGCGC TCAGCTTCGT CTTTCAGGCC
GTGACGCGCC TCGCCACGCA GGTGATCCTG CCCGGGTTCG ACCCCAAGGC AGCGATTCGC
GACCTCAGCC GCTACCGCAT CAACGAGGTT TTCACCGTCC CGACGATGCT GAAGATGATG
CTCGACGATC CCACGTTCGC CGACCATGAC CTGAGCAGTC TCAGGAACAT CATCTACGGC
GCTGCCCCGA TTGACGGCGC ACTGCTGCAG CGCGCCATGG CGCAGATTCC GTCCAGCCAG
TTCCTGCAGG CCTATGGGAT GACGGAGACC TCGCCTGTCT CGGCGATACT GGCGGCCGAT
TGTCACGTCG TCGGCAGTCC GAGGCTGAAG GCGGCCGGCC GCCCGGCGCC CGCGTGCGAA
GTGCGCATCG TCGATCCGGC AACGGACGAA GACTGCCCGA CGGGCACGGT GGGCGAGGTC
GCGGTGCGCG GCCCGGGCGT GATGCTGGGC TACTGGAACA AGCCGGAAGA AACCGCCCGC
GCGTTGCGCA ATGGCTGGAT GCACACCGGC GATGCCGGAT ACCTGGATGC GGACGGCTTT
CTATACGTCA CCGATCGCAT CAAGGACATG ATCATCAGCG GCGGCGAGAA CGTCTATTCG
ACCGAAGTCG AGAATGCGAT CCTCACGCAC CCCGCGGTGC AGCTGTGCGC GGTGATCGGC
ATCCCTGACG AGAAATGGGG GGAAGCTGTG CATGCGGTCA TCGTGGTCCG CCCCGGTCAC
GAGCTGTCTG TCGATGCGGT GCACGCGCAT TGCCGCGAGC GGATCGCCAG CTATAAATGC
CCCCGCAGTG TCGAGTTCCG CGCCGACATG CCGCTCTCGG CGGCGGGCAA GCTCCTCAAG
TACAAGCTGC GTGAAGTCTA CTGGCAGTCG CGCGACCGGC GGATCTGA
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| Protein sequence | MYLTQALHKA FRENPSGVAT IFAQRSTTFS QLIDRVARLA SALRGQGVAA GDRVAMLALN
SDRYVEYIFG TLWAGAALNP VNTRWSVAEI AYSMEDCGTS VLLVDDNFLD LIGPLRERCP
CIQTVIYCGD AETPAGMIDY EQLVRSSAPI ADSLRSGHDL AAVLYTGGTT GAPKGVMLSH
ANIASNVLSS LAAASRPPVT SILQMAPMFH IAALSFVFQA VTRLATQVIL PGFDPKAAIR
DLSRYRINEV FTVPTMLKMM LDDPTFADHD LSSLRNIIYG AAPIDGALLQ RAMAQIPSSQ
FLQAYGMTET SPVSAILAAD CHVVGSPRLK AAGRPAPACE VRIVDPATDE DCPTGTVGEV
AVRGPGVMLG YWNKPEETAR ALRNGWMHTG DAGYLDADGF LYVTDRIKDM IISGGENVYS
TEVENAILTH PAVQLCAVIG IPDEKWGEAV HAVIVVRPGH ELSVDAVHAH CRERIASYKC
PRSVEFRADM PLSAAGKLLK YKLREVYWQS RDRRI
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