| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5309 |
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| Symbol | |
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| ID | 4042170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2012008 |
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| End bp | 2017242 |
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| Gene Length | 5235 bp |
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| Protein Length | 1744 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980727 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_587437 |
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| Protein GI | 94314228 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG0642] Signal transduction histidine kinase
[COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0910571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACG ACGCACTCGC CTCCACGAGC CAGCCCATCG CCACCAGCAT GACCTCCCTC
CCCCGCATCG AACACGCTCC CGTGCCGGCC TTCGACCCTG TCTGGCTTGC GCGGGTCGAA
TCGACCGTGC TGCTGACGGG AGATCACGTC CAGTCCTGCC GACTGTTTGA CCCGGTCTCG
CAGACCCACT GGTTTGCCCA AAGCGCGCCG CTGACGGCCA CGGCCGTGTG CGAGCGCCTG
CGGAACGCGG CGCGGCTTGC CACGCGCATG GAGTCATCGT GGGCGGCGAT ACCGGCGGCC
ACGATCTGGA CGCCTGACCG GCTTGTGCTG ATCAGCGACG CCGAGGCCTC CACCCAATTC
GGCATGGTGA ACGCCAGCGA GCGCGAAGAC GTCCCGATCG CCGCCCGCCT GGAACTGGCA
ATCGGCGCGG TCAGGGCCGT GGCGGCCATG CATGGGCGCG GCCTGCTGCA AGGTGTGATC
CGGCCAGAAA GCTTCCTGCT CGACGACGAT GGGCGCATGC GGCTCACGGG GTTCGGATAT
GCCGTGGCCG TTGAGGAACC CTGCGCCGCG CTGCGGCATC CGGCTGATAC CGTCTTGCCA
TATCTGGCAC CGGAACTGAT GCGGCAGGAT GGGGCGCGGC CGAGCGTCGG CGCCGATCTC
TACGCGCTCG GTGTCACGCT ATACAAGCTA CTGACCGGCG AACTGCCGTT CGTTGCGGAC
TCGCCGTCCG GATGGCAGCA CGCGCATATG GCCATCGAGC CGGCCCCGCC GCAGTCGCGT
CGGCCCGATT TGCCTGCCGT GCTTGGCCAG ATCGTCATCA AGCTGATGGC CAAGGATGCC
GGTAGCCGCT ATACCTCGGC GGCGGCGCTG CTGGCGGACC TGCTACGTGT CCGTGCCGAG
TGGCTGCAGC GCGGGCGTAT CGAACCGTTC TGCCTCGACA TGCCGGGCAC GCTGCCGTTG
CCAGGGACGG GGTCGGGCCT TCAGGGGCGG CTGTCCGGCC GCGCCAGGGA GATGGAGGTG
CTGCATGGCG CGCTGGCACG TGTCCGTGCG ACCGGGGTAT CGGAACTGGT ACTACTCGCC
GGTGCGGCCG GTGTGGGAAA GTCGGCATTG GCCGAATGGC TGTGCGGGCA CGCGGACCAG
ACCGGGGCCC GCTTCGCGGT GGGCAAGAGC GATCAGTTGC AGCGCGATAT TCCCTATGCG
CCGGTGGTGC AGGCCATTAC ATCGCTGACC ATGACGTTGC TCGGCCAGGA CGATGCGTCG
TTGCAGCAGG TGCGCCTGCG CTGGCTCGAT CGGCTGACCG GGCAGGGGCG CGCGGTCGCC
GAACTGGCGC CCGTCGTCGA GTACGTACTG GGCGCCACCG TGCCGCTCTC GGAAGTGCCG
GCCCGTCAGG CTCAGGCGCG GATCGAAAGC GCGGTACTGC GTACGTTTGC TGCGTTCGCC
GCACCCGGTG AGCCGCTGGT GCTGTTCATT GATGACCTGC AATGGGCCGA TGCTTCCACG
CTTGGCCTGC TCGAGGCGTT CGCGGCACAT CGCCCCGCCA ACATCCTGCT GATCGCAGCC
TATCGCGAGC CCGGCCACGA AATGGCGCAG CGCCTGGCGT GGTTGCAGCA GGGCAGTCGT
AGCGGTGGAT TGCCGGTGTC GAGCATTGCG CTCCAGTCAC TGCCCGGGCG GGCCGTGGCC
GATCTGGTGG CCACCGCGCT CGATGCGCCG GTGGCGCAGG TGGCGCCACT TGCCCGTGCG
ATCCACGCCA GAACCGGCGG CAATCCGCTT TTTTGCGTGC AGCTGCTGCG GGCGCTGATT
GACGACGGCG TGCTTGCGCG TGGCGAAGCC GGCTGGGCCT GGGACGATGC CGCGCTGGCG
CACCGGCGCT ACTCGGACAA CGTGATCGAA CTGATGCTAC GGCGCTTCGC GCGGCTGCCG
AAGTCGGGCA CCGCGCTGCT GCAGCATCTG GCATGCGTGG GCATTCGCGG TGAAGCGGCG
TTGCAGGCCC GCGTGGCCGG CGTCGGGCCG GATGAACTGG CCCACGGGCT GCGTCCGTTC
ATCGATGCCG GGATGATCGT CGAGGTGCCG GAGGGCTTCG CGTTCCAGCA TGACCGCGTG
CTGGAAGCCG CCTATTCGTT GGTGGAACCG GAGGCGCGCC CGGCCGCGCA TGCACGTGTG
GCACGCGTCA TGATCGAACA CTGGGGCGAG CACGCGGCGG ACCACGCGTT CGAGATCGGC
AGCCAGATCG AGCGGACTGC GGGGCAGGCG CTATCCGAGC CCGAGCGGGT GATGTTCGTG
CGGGCGCTCA ATGACTCGGC GAGACGGGCC AAGCGTGCGG CCGTGCTGAC GCGCGCGGCC
AGCCATGTGG ATCTGGCGTT CACGTTGATG GATGCAACCT GGTGGGACAC CCACTACCCG
CTGGCGCGCG ACGCGCATCT GTTGCGCTGC GAGTGCCTGC TGGCGCAGGC CGATCTCGAC
CGCGCCGCGC GGGAGATCGA CACCTTGCTG CAACGCGCGA TGCCGGCGGT CGACAAGGCC
GCCGTGTATC GCCTGCTGGC TACGCTGCAG ACCGTACGGT CCGACTACGA AGGGGCGATC
AATGCCGCGC TTTCAGGGCT GGCGCTGGTG GACGTGCATC TCGAACGACA CCCGTCGCCC
GCGCGAATGC GGGAGGCCTA CGAATCGGTC ATGGTGTTGC TTGGCGAAAG GTCCATCGAC
AGTCTTGGCG AGCTTCCCGT CACGGCCGAC GCGCGGATGC ACACGGTCAT GGGGTTGCTA
TCGACGCTGA TTTCTTCGCA GTTCGTGCGC GATGGGATCA GCTTCCTTCA TGTGGCGACG
ATGGTGGAAC TCTCGCTCGC GCATGGCGCG ACACCCGAGA CGCCCTATGG CCTTTCCTGG
TTCGGCGTCT TTATCGCCAG CCTTTATGAC GCGTACGAAG ACGGCCTCGC CTTTGGGCTG
GCGGCGATGG CGCTGGTGGA GCGGCATGAG TTTCAGGCCG AGCAAATTGC CACGCTGGTG
GCGGTGGACC AGGTCAGCGT CTGGACCCGC CCGCTGGCGT TCGCGCTCGG ACTCGCCCAG
GAGGCCGTGG CACTGGGGCG GGAGTCGGGC GATATCGGCA TGGCCTGCTA TGCCTGCAAT
CACATCGTCT CGGATTTGCT GGCGATGGGC GAGCCGCTTG CACTTGTCGA TGAAGAGATC
GAACGTGGCG TGGGCCTGAC ACGGCTGGTT CGCTATGCCG ATATCGAGCG GATTCTGGCT
GCACAGCGGC TCTTCCTGCG CAGCCTGCGC GACGGTGGCG ATGGCCCGGC ATCGACGGTC
GCGCAGCGGG CCGATGACGC GACCTCTTTC TCGACGCGCT TCTGGGTCTG GCTCCACGAC
GGCATGGCGT GGGCATACCG TGGCCAATGG ATGCACGCGC TCGGCAGCCT GCGGCAGGCG
GAAGCGCTGG CATGGTCGGC GCCGGCCCAT ATCAACGTGG CCGATTGCCG CTTGTACCTG
GCATTGGCGC TGGCACATGC CGCGCCGGCC GATGTCGATG GTGTCGATGG TGTCGAGGGT
CTCGATCGTG CCGTAGTCCT CGCCGCGCTG GCCGGTCACC GGGACCGCTT TGCGCGCTGG
ACTGCGCTGA ATCCGCTGAC GTTCCGGAAC AAGCTGCTGC TGATCGACGC GGAAATGCTG
CGTCTGCAAG GCGATGCCAT GCGGGCGCTG GCGAGTTACG AGCAGTCGGC GCGGGTCGCG
GCGGCATCGG GGTTCGTGCA CGAGCAGGCG CTCGCTTGCG AGCTGGCGGG TGCGCTGTGT
CTGGCCAACG GGCTGCCGGA CTCAGGGCTG CACCATCTGC ATTCGGCACG CGACGCGTAT
CGCCGCTGGG GTGCTCACCA CAAGGCGGAC CAGCTCTGCT GCCAGTATCC CGAGCTTGGT
GATGCCGGTG CGGGTGGCCC GGAGCCGGTG CCAGCCGAGC CGGCGCGGGT GGCAGCCGGC
TGGGAACTCG GCATGCGGGC CGCCCAGGCC ATGAGCAGCG AGCGCGTCAT GGATCGGCTG
ATTGAGTCGC TAATGGCCGA TGTGGTGGTC CATGCCGGTG CGCAGTACGG GTTGCTGCTG
CTGATGCGTG GCGATCGTCC GATGATCGAG GCGTCCGCGC GCGTGGTCGA CGGCGCCGTT
TCCACCACGC TTGGCGCCGT AGAGCCGAAC GACGACCTTC TGCCGCTTAC CGTCCTCAAC
AGCGTCCTGC GCACGCGTCA GACCTTCGCG CTGGCTGATG CCTCGGCCGA TGCGCCGTCG
ATCCGGATGC GCGGCGCGTC CGGGCGGCGG TTGCGCTCGC TGTTGTGCCT GCCGCTGGTG
CGCGGCGGCA CGTTGATCGG CGCGTACTAC CTTGAAAACA ACCTGGCGCC GGGCGTGTTC
GGTGCTGGCC GGATTGCCGA ACTGGAGGTG CTGGCGCCGC AGGTGGCGAT TGCGCTGGAG
ACTGCGCGGC TCTACGAGCA ATTGATCGAC GAGAACGATC GCCGCCTGGC AGCCGAGATG
GGCCTGCGTT CGGCCCGTGC CGAGCTTGCG CGGACCTCTC ATCTGACGGT GATGGGCACG
CTGGCGGCCT CCATCGCCCA TGAGGTGAAC CAGCCGCTGA CGGCGATCGT GGCGTCGGTC
GATGCCAGCC TGCGCTGGCT CAACCGCGCC ACACCAAATC TCGGCGAGGT TCAGGACGGG
CTCGCGCATA TCCGCAAGAA TGGCCTGCGC GCAGCCGAGA TCATTCGTGC CTTGCGCGCG
CTGGCCAGGC AGACCCCATC GGTGATGACA CCGCTGCAGC CAGACGAGGT TCTGAGCGAA
GTGCTCGATA TGGTGCGTAT GGAAATCGCC GGACACGGCG TGCGGGTCTC GACGAGCTTG
TCCACGGGCG GCGCGCTGGT GGCGGCAGAT CGCGTGCAGT TGCAGCAGGT GATGCTGAAC
CTGATCACCA ATGCTATCGA CGCAATGGCG ACGACGCCGC CGGATGCGCG CGATCTGGTG
ATTGCTTCGG CGCTGGAGAA TGCCGACGTC GTGATCCGGG TCGAGGACGC CGGCCGCGGC
ATTCCCGACG CCATGCGTCA GCGGCTGTTC GACCCGTTCA TCACCAGCAA GCAGAGCGGC
ATGGGCATGG GGCTTGCCAT CTGCAAGTCG ATCGTCGAGG CCCACGGCGG CGAGCTCGAT
GCGGCGCCGC GCGATGGCGG TGGCACGGTG TTCACGTTCC GGCTGCCAGT TCTGGGGAGC
GCGACGCGCC CTTGA
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| Protein sequence | MRDDALASTS QPIATSMTSL PRIEHAPVPA FDPVWLARVE STVLLTGDHV QSCRLFDPVS
QTHWFAQSAP LTATAVCERL RNAARLATRM ESSWAAIPAA TIWTPDRLVL ISDAEASTQF
GMVNASERED VPIAARLELA IGAVRAVAAM HGRGLLQGVI RPESFLLDDD GRMRLTGFGY
AVAVEEPCAA LRHPADTVLP YLAPELMRQD GARPSVGADL YALGVTLYKL LTGELPFVAD
SPSGWQHAHM AIEPAPPQSR RPDLPAVLGQ IVIKLMAKDA GSRYTSAAAL LADLLRVRAE
WLQRGRIEPF CLDMPGTLPL PGTGSGLQGR LSGRAREMEV LHGALARVRA TGVSELVLLA
GAAGVGKSAL AEWLCGHADQ TGARFAVGKS DQLQRDIPYA PVVQAITSLT MTLLGQDDAS
LQQVRLRWLD RLTGQGRAVA ELAPVVEYVL GATVPLSEVP ARQAQARIES AVLRTFAAFA
APGEPLVLFI DDLQWADAST LGLLEAFAAH RPANILLIAA YREPGHEMAQ RLAWLQQGSR
SGGLPVSSIA LQSLPGRAVA DLVATALDAP VAQVAPLARA IHARTGGNPL FCVQLLRALI
DDGVLARGEA GWAWDDAALA HRRYSDNVIE LMLRRFARLP KSGTALLQHL ACVGIRGEAA
LQARVAGVGP DELAHGLRPF IDAGMIVEVP EGFAFQHDRV LEAAYSLVEP EARPAAHARV
ARVMIEHWGE HAADHAFEIG SQIERTAGQA LSEPERVMFV RALNDSARRA KRAAVLTRAA
SHVDLAFTLM DATWWDTHYP LARDAHLLRC ECLLAQADLD RAAREIDTLL QRAMPAVDKA
AVYRLLATLQ TVRSDYEGAI NAALSGLALV DVHLERHPSP ARMREAYESV MVLLGERSID
SLGELPVTAD ARMHTVMGLL STLISSQFVR DGISFLHVAT MVELSLAHGA TPETPYGLSW
FGVFIASLYD AYEDGLAFGL AAMALVERHE FQAEQIATLV AVDQVSVWTR PLAFALGLAQ
EAVALGRESG DIGMACYACN HIVSDLLAMG EPLALVDEEI ERGVGLTRLV RYADIERILA
AQRLFLRSLR DGGDGPASTV AQRADDATSF STRFWVWLHD GMAWAYRGQW MHALGSLRQA
EALAWSAPAH INVADCRLYL ALALAHAAPA DVDGVDGVEG LDRAVVLAAL AGHRDRFARW
TALNPLTFRN KLLLIDAEML RLQGDAMRAL ASYEQSARVA AASGFVHEQA LACELAGALC
LANGLPDSGL HHLHSARDAY RRWGAHHKAD QLCCQYPELG DAGAGGPEPV PAEPARVAAG
WELGMRAAQA MSSERVMDRL IESLMADVVV HAGAQYGLLL LMRGDRPMIE ASARVVDGAV
STTLGAVEPN DDLLPLTVLN SVLRTRQTFA LADASADAPS IRMRGASGRR LRSLLCLPLV
RGGTLIGAYY LENNLAPGVF GAGRIAELEV LAPQVAIALE TARLYEQLID ENDRRLAAEM
GLRSARAELA RTSHLTVMGT LAASIAHEVN QPLTAIVASV DASLRWLNRA TPNLGEVQDG
LAHIRKNGLR AAEIIRALRA LARQTPSVMT PLQPDEVLSE VLDMVRMEIA GHGVRVSTSL
STGGALVAAD RVQLQQVMLN LITNAIDAMA TTPPDARDLV IASALENADV VIRVEDAGRG
IPDAMRQRLF DPFITSKQSG MGMGLAICKS IVEAHGGELD AAPRDGGGTV FTFRLPVLGS
ATRP
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