| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4775 |
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| Symbol | |
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| ID | 4041637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1420010 |
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| End bp | 1421191 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980196 |
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| Product | putative ABC transporter substrate binding protein |
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| Protein accession | YP_586906 |
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| Protein GI | 94313697 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00131883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.383486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCA GTCCGATGCG GCGTGCCATC ACGGCCTGCA GCGCCTTCGC CGTCCTCACG
TATCCCCTCC TCACCCTTGC GGCCGATCCC GTGAAGATTG GCCTGATCGC CCCGTTTTCT
GGCAGCTTTG CCGACTACGG CAAGCAGATG GAAGGCGGCA TCAAGGCCTG GCAGAAGCTG
AACGGCGACG TCGTGGCGGG CCGCAAGATC GAGGTGATCA TGAAGGACAC CACGGGTCCG
GTCCCCGAGG TCGCCAAGCG GCTGGCGCAG GAGCTGGTGG TGCGCGACAA GGTCGATATC
CTGGCAGGCT TCGGCCTGAC GCCCGAGGCG CTGGCCGTTG CCCCGGTCGC CGAGCAGGCG
AAGAAGCCGA TGGTGATTTT CAATGCGGCG TCGTCGGTCA TCACCACCAA GTCAAACTAC
ATCACCCGCG TGTCGATGAC GCTGCCGCAG ATCTCGGCAC CGATGGCGAC GTGGGCCGTT
CGCAATAACG TCCGCAAGGT CGTGACGCTG GTCGCAGACT ACGCCCCTGG CATCGACGCC
GAAACGGCCT TCAAAACCAA CTTCCTGGGC GGTGGCGGCC AGATTGTCGA ATCGATCCGC
GTGCCGCTGC GAAATCCCGA GTTCGCCCCG TTCATCCAGC GCATCAAGGA TGCCAAACCC
GAGGCCGTGT TCCTGTTCCT GCCGGCAGGC GAACAAGGCG TGGCGTTCAT GAAGGGCTTC
CGCGAACGTG GGCTGGCCGA TGCCGGTATC CGCGTCATCG CCACGGGCGA CCTGACCGAC
GACCACGTGC TGCCGGCCAT GGGCGATGCC ACGTTGGGCG TGATCACGTC GTTCCACTAC
TCGGCGGCGC ATGATTCGAA GGAGAACAAG GCGTTCCTGA AGGCCTTTGC CGATGCCAAC
CCAGGGGCCG GACGCCCGAA CTTCATGGCC GTGGCCGCAT ACGACGGCAT GGCCGCCATC
TACGATGCGC TGAAGAAGAC CAACGGCGCG ACGGACGGCG ACAAGCTCGT TGGCGCTCTG
AAGGGCATGA AACTGCAGAG CCCGCGCGGC GCCATCACGA TTGACCCCGC CACCCGCGAC
GTGGTCCAGA CGGTCTATAT CCGGAAGGTA GAGAAGGTGA ACGGCGAGCT CTACAACGTC
GAATTCGACA AGTTCGATGG CGTGAAGGAC TCGGGGAAGT AG
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| Protein sequence | MTFSPMRRAI TACSAFAVLT YPLLTLAADP VKIGLIAPFS GSFADYGKQM EGGIKAWQKL
NGDVVAGRKI EVIMKDTTGP VPEVAKRLAQ ELVVRDKVDI LAGFGLTPEA LAVAPVAEQA
KKPMVIFNAA SSVITTKSNY ITRVSMTLPQ ISAPMATWAV RNNVRKVVTL VADYAPGIDA
ETAFKTNFLG GGGQIVESIR VPLRNPEFAP FIQRIKDAKP EAVFLFLPAG EQGVAFMKGF
RERGLADAGI RVIATGDLTD DHVLPAMGDA TLGVITSFHY SAAHDSKENK AFLKAFADAN
PGAGRPNFMA VAAYDGMAAI YDALKKTNGA TDGDKLVGAL KGMKLQSPRG AITIDPATRD
VVQTVYIRKV EKVNGELYNV EFDKFDGVKD SGK
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