Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4004 |
Symbol | tnpA |
ID | 4040862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 576113 |
End bp | 577132 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637979428 |
Product | transposase for insertion sequence element IS1086 |
Protein accession | YP_586141 |
Protein GI | 94312932 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGAA CGAAGTACCA ACAACTACAA CCCGAAGAAC GCATGCGCAT CGAGATTTGG AAGGCAGAAG ATGTCAGCCT GCGGGCCATG GCCCGCAGGC TTGGCCGCGC GCCTTCGACA CTGATGCGTG AGCTTCGCCG CAATGCCACC GCCCGTGGCG GCTATGGCGC AATGAGCGCA CAAGCCTGCC GTACGCAACG CCTCAAGGCC AGCCGTCCGG TCGCTAAGCT CGCTCCTGAT GGCGTATTGT GGGGCGTGGT GCGCCACTTC CTCGATCAGA AGTGGTCGCC CCAGGAAATC TCCGCTACGC TCAAGCGGGC CTTTCCTGAC CAACCCGACC TCAACGTGTC CCACGAGACC ATCTACAACG CCATCTACGC ATACCCGCGG GGTGAGCTGC GCCGCCAGCT CATCGCCTGC TTGCGACAGG CCCGAACCAA GCGTCTGCCG CGCTCGCGTG GAACCGACCG GCGCGGCCAG ATTCCCGACA TGGTCAGCAT TCACGTGCGC CCGCCCGAGG TGAACGACAG GCTGATGCCC GGGCACTGGG AGGGCGACCT CATCAAGGGG GCGGGCAACC AATCCGCCGT AGGCGTGCTG GTTGAGCGCA TGAGCCGCGC CGTACTGCTG GTCAAGATGC CAGACGCCAC CGCTGCATCG GCTCTGGCCG GCTTTACCGG GAAGCTGCAA TCCCTGGTGG CGCCGCTGCG CCAGACCCTG ACCTACGACC AGGGTCGAGA GATGGCCAGG CACGCCGAAC TGAGCGCCGC CACTGGCGTG CGAGTGTACT TCTGCGACCC GCACAGCCCC TGGCAGCGCG GCACCTGTGA GAACACCAAT GGTCTGCTGC GCCAGTACTT ACCCAAGGGC ACCGACCTGT CCGTCTACTC GCAGGAGGAA CTTGACGCCA TCGCCGACAG CCTCAACGGC CGCCCGCGCA AAACCCTGAA CTGGCACTCC CCGCTACAAG TCCTCGCTCA GGTTCTGGCC AATCCCACGG ACCGGCTTCC TGTTCAATAA
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Protein sequence | MTRTKYQQLQ PEERMRIEIW KAEDVSLRAM ARRLGRAPST LMRELRRNAT ARGGYGAMSA QACRTQRLKA SRPVAKLAPD GVLWGVVRHF LDQKWSPQEI SATLKRAFPD QPDLNVSHET IYNAIYAYPR GELRRQLIAC LRQARTKRLP RSRGTDRRGQ IPDMVSIHVR PPEVNDRLMP GHWEGDLIKG AGNQSAVGVL VERMSRAVLL VKMPDATAAS ALAGFTGKLQ SLVAPLRQTL TYDQGREMAR HAELSAATGV RVYFCDPHSP WQRGTCENTN GLLRQYLPKG TDLSVYSQEE LDAIADSLNG RPRKTLNWHS PLQVLAQVLA NPTDRLPVQ
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