Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3859 |
Symbol | |
ID | 4040553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 401419 |
End bp | 402480 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979278 |
Product | tRNA 2-selenouridine synthase |
Protein accession | YP_585996 |
Protein GI | 94312787 |
COG category | [R] General function prediction only |
COG ID | [COG2603] Predicted ATPase |
TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAG TCGTAAGAGT CGAAGACCGC CACGCGTTCG ACACGATCAT CGACGCCCGC TCACCGGCGG AGTTCGAGAT CGACCATATT CCCGGCGCCA TCAACTGCCC GGTTCTCGAT AACGAGGAGC GCCGCATCGT CGGCACGCTG TACAAGCAGG TCGGCGCATT CGAGGCGCGA CGTGTCGGCG GTGCCATGGT GGCAGCCAAC CTCGCCCGCC ATTTGCGCGA GCAGTTCGCC GATCGCCCGT CTGGCTGGCG GCCGCTGGTG TATTGCTGGC GCGGCGGGCT GCGCAGCGGC TCGATGACGA CGTGGATGCG CATGGTGGGC TGGGATGCCC AGCAGCTTGC CGGCGGCTAC AAGGCCTGGC GCCGTCACGT TATCGATGTG CTCGACACGC AGGCCGCGCG CGCGCCGCTG GTCGTGATCT GCGGCGCCAC AGGCAGCGGC AAGACGCGCG TGCTCCATGC ACTGGCCGCA CAAGGCGAAC AGGTGCTCGA TCTCGAAGGG CTGGCCCGGC ACAAGGGATC GCTGCTCGGC GCATTGCCCG ATGTCGCCCA GCCTTCACAG ACCGCGTTCG AGACCGCACT GGCGGATGTG ATCGAGCGCG TCGATCTGGC CCGGCCGCTT TATGTGGAAG GTGAAGGCGC GCGCATTGGC AAGCTCAATC TGCCGGTGCC GCTGGTTGCC CACATGCGCG AAAGCGCCTG CGTGGAGATC GACGCATCGC CAGAAACACG ACTCGCGTTC CTGCTGCATG ACTATGCGTA TCTTGGCGAT CGGCCCGCCT GGCTTGCCGA TCAGCTTGGG CGGCTGAAGG AACTGCACGG CAAGACCATC ATCGCCGCGT GGCAGGAGAT GGCGACCACA GGAAACCTGC GCCAGCTGTT CGGCGAACTG GCGACCGAGC ACTACGACCC TTCCTACGCG CGCTCGCAAC GCAAGCATTT TCACAAATGG GACGCGCGGC GCGTGGTGCA CGCGGACAGC CTCTCCGCGC AGGGCATAGA AGCGTTGGCT AGGTCGATCG TGCAAACAGT GGCGGAGCAG CAACCCGCCT GA
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Protein sequence | MKPVVRVEDR HAFDTIIDAR SPAEFEIDHI PGAINCPVLD NEERRIVGTL YKQVGAFEAR RVGGAMVAAN LARHLREQFA DRPSGWRPLV YCWRGGLRSG SMTTWMRMVG WDAQQLAGGY KAWRRHVIDV LDTQAARAPL VVICGATGSG KTRVLHALAA QGEQVLDLEG LARHKGSLLG ALPDVAQPSQ TAFETALADV IERVDLARPL YVEGEGARIG KLNLPVPLVA HMRESACVEI DASPETRLAF LLHDYAYLGD RPAWLADQLG RLKELHGKTI IAAWQEMATT GNLRQLFGEL ATEHYDPSYA RSQRKHFHKW DARRVVHADS LSAQGIEALA RSIVQTVAEQ QPA
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