| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3656 |
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| Symbol | tadA |
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| ID | 4040472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 190815 |
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| End bp | 192131 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979079 |
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| Product | type II/IV secretion system protein, ATPase domain-containing protein |
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| Protein accession | YP_585797 |
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| Protein GI | 94312588 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG CGATCGAATT CTCGGACAAC GCTGCTGCCC CGTTTCCTGT TTCGCAGGAG
TTCCACAATA TCAAGGAGGC CGCGCACGAA CACCTGCTGA CGCGCATCGA GGAGCTTGGC
GCCGAGTTCG GGCGCTGGTC GCGCGCGGCC ATCCAGCGTT TTGTCGATCT GGAACTGGAG
AGTTTCACGC GCCTGCGCCG CATTCCGATC AACGAGGCCG AGCTGCGCCA GATTTCCGAG
GCGCTGACCA ACGAGCTGGC GGGCTTTGGG CCGATCGAGG ATCTGCTCAA CGATCCGGCG
GTGGAAGATA TTCTCGTCAA CGGCCACATG GACGTCTACG TGTCACGCCA CGGCGTGCTG
GAGCGGATTC CGGTGCGGTT TGCCGATGGC GGGCACTTGC TGCGCATCGT GCGGCGGATC
CTGGCGCCGA TTGGCCGCCG CCTGGACGAA TCGAATCCGA TGGTCGATGC GCGCCTGCCA
GACGGCGGCC GTATCAACGT GATCATCCCG CCGCTGGCGC TGGAAGGTCC GGTCGTCTCG
ATCCGGAAAT TCCGCAAGGA TCCGCTGACG CCGCTCGATC TGCAGACACT CGGCACGATG
AGCCCGGAGA TTACCGAGCT GCTTGACGCC GCCGTGCGCG CGCGCTGCAA CATCCTTGTG
AGCGGTGGCA CCAGTTCAGG CAAGACGTCG CTGCTCAACG CACTGGCCAC CTTCATCCCG
TCCACCGAGC GTGTGATTAC GATCGAGGAC ACGGCCGAAC TGGCGCTCAA TCACCCGCAC
GTGGTCCGGC TGGAGAGCCG TCCCGGCGGC TTCGAAGGTA CCGGCACGGT GACGATCCGC
GACCTGCTGC GCAACAGCCT GCGGATGCGT CCGGACCGCA TCATCGTGGG CGAAGTGCGC
GGCGGCGAAG TGCTGGAAAT GCTGCAGGCG ATGAGCACGG GCCACGACGG CTCGATGGGC
ACGATCCACG CCAGCAGCCC GCGCGAATGC CTGTACCGGC TGGAGATGCT GGCCGGGTTC
GCGGGCTTCC AGGGCAGCGA AGTCAGCCTG CGCCGCCAGA TCGCCAATGC GATCGACTTC
ATCGTGCAGA TCGGCCGGCT GTCGAATGGC CGGCGTCGCA TCCTGTCGAT CACGGAAGTG
ACCGGACTGG GCGACAACAT CATTTCCACG CAGGAGCTTT ACCGGCACGA ACCGGTGCAG
AACCCGGATG GCACTGAAAG CGACCGCTGG CAGTCGCTTG GCATCCTGCC GCATTCGCCC
AAGCTGGCGC GGATGCGGCC GGCCAACTTC TCGCTGGATG ACCGCTTTGA TCTCTAG
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| Protein sequence | MTDAIEFSDN AAAPFPVSQE FHNIKEAAHE HLLTRIEELG AEFGRWSRAA IQRFVDLELE
SFTRLRRIPI NEAELRQISE ALTNELAGFG PIEDLLNDPA VEDILVNGHM DVYVSRHGVL
ERIPVRFADG GHLLRIVRRI LAPIGRRLDE SNPMVDARLP DGGRINVIIP PLALEGPVVS
IRKFRKDPLT PLDLQTLGTM SPEITELLDA AVRARCNILV SGGTSSGKTS LLNALATFIP
STERVITIED TAELALNHPH VVRLESRPGG FEGTGTVTIR DLLRNSLRMR PDRIIVGEVR
GGEVLEMLQA MSTGHDGSMG TIHASSPREC LYRLEMLAGF AGFQGSEVSL RRQIANAIDF
IVQIGRLSNG RRRILSITEV TGLGDNIIST QELYRHEPVQ NPDGTESDRW QSLGILPHSP
KLARMRPANF SLDDRFDL
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