| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3562 |
|---|
| Symbol | |
|---|
| ID | 4040411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3863387 |
|---|
| End bp | 3864760 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637978980 |
|---|
| Product | sun protein |
|---|
| Protein accession | YP_585703 |
|---|
| Protein GI | 94312493 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGC CACCAGATTC CCTTGCCTTC CAGATGCTCG GCGCCGCCGC TGCAGTACGC
GGCGTCCATG AAGGCACGGC CCTGCCGCAA GCCATCGAGG ACGCCACCAA CCTGCTGCGC
CTGGACCGCG TGCGCGATGC CGCGACGCGC GGCGCCATCC AGGACCTGGC CTATCGCACC
GTGCGGCAGT TCGGCGCCAC ACGCGCCCTG GTGACGCAAC TGGTCACACG CCCGCCCGGC
GCGCTGGTCG ACTCCCTGCT GGCCGTGGCG CTCGCGCTGC TGCTCGAAGG CGAGGAGGGC
GATCGGAGCA AGGTCGGACG CGGCGGCTAC TCCGACTTCA CCGTCGTCGA TCAGGCCGTC
AGCGCGGCGG CCTCGGAGCC AAAGACCGCC CACGCGCGCG GGCTCGTCAA CGCAGTACTG
CGCCGGTTCC TGCGTGAGCG CAAGGCCCTG ATGGACGCGA TCGCCAAGGA CGAGGAAGCG
CGCTGGAACC TGCCCACGTG GTGGCTTGAG CAACTCCGCG CCGCATACCC GGATCGATGG
ATGGCATTGG CAGAGAGCGT CAATGTCCGC CCGCCAATGA CATTGCGCGT CAACACCAAG
CGCCTGTCGG TCGACGAATA CCTGAAGGAA CTGGCCAACG CGGGCATGGC GGGCACCGCC
ATCGGCCCTC AGGCCGTGCG GCTGGTTCGG GCATTTCCGG TATCGCAAGT GCCAGGTTTC
GCCACCGGCG ATGTCTCCGT ACAGGATGCC GGCGCCCAGC TTGCCGCGCC GCTCTGCGAG
GTTGCCGACG GGATGCGCGT GCTGGACGCC TGCGCGGCCC CCGGAGGCAA GACCGGCCAT
CTGCTCGAAC TGGCCGATAT CCATGTGACC GCCGTGGAGA GCGATGCGGA GCGAGCCGCG
CGCATTCATG AGAATCTGGC CCGCCTGGAC CAGCGTGCCG AGGTCATCGT TGGCGATGCC
AGCCGCCCGA AGGACTGGTG GGATGGCCAG CAGTTCGACC GCATTCTGGC CGATGTGCCG
TGCTCGGCGT CGGGCATCGT CCGACGCCAT CCCGATATCC GCTGGCTGCG ACGCGAATCG
GACATCGCGA AGCTTGTCAA TGAGCAACGT CGCATCGTGT CGCAATTGTG GTCGCTCCTT
AAGCCAGGCG GCATTCTGGT CTATGTGACC TGTTCTATTT TCCCAACGGA GGGCGAGGAG
CAGGCGCTCT GGTTTGGTGC CCAGCTCCCA GATGCGATAC GATTGCAGGC GCCCGGGCAG
CTCCTGCCCG GCACGAAGGC GCAGGAGACG GCCGGCACCA ACATGGCCGG CCAGCCAAGC
CTGCCATCGG ATCACGATGG CTTCTACTAC GCCCGCTTCC AGAAACGCGC CTGA
|
|---|
| Protein sequence | MRLPPDSLAF QMLGAAAAVR GVHEGTALPQ AIEDATNLLR LDRVRDAATR GAIQDLAYRT
VRQFGATRAL VTQLVTRPPG ALVDSLLAVA LALLLEGEEG DRSKVGRGGY SDFTVVDQAV
SAAASEPKTA HARGLVNAVL RRFLRERKAL MDAIAKDEEA RWNLPTWWLE QLRAAYPDRW
MALAESVNVR PPMTLRVNTK RLSVDEYLKE LANAGMAGTA IGPQAVRLVR AFPVSQVPGF
ATGDVSVQDA GAQLAAPLCE VADGMRVLDA CAAPGGKTGH LLELADIHVT AVESDAERAA
RIHENLARLD QRAEVIVGDA SRPKDWWDGQ QFDRILADVP CSASGIVRRH PDIRWLRRES
DIAKLVNEQR RIVSQLWSLL KPGGILVYVT CSIFPTEGEE QALWFGAQLP DAIRLQAPGQ
LLPGTKAQET AGTNMAGQPS LPSDHDGFYY ARFQKRA
|
|---|
| |