Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3017 |
Symbol | |
ID | 4039845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 3275467 |
End bp | 3276810 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637978417 |
Product | ferric reductase-like transmembrane component-like |
Protein accession | YP_585159 |
Protein GI | 94311949 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4097] Predicted ferric reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.812063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00768092 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAGAA TAATTTGGAC GTTCTGGTTT TTTGCGCTGG CATTGAGCGC TTTATGGCTT TTTACCGATA CGCTCTGGCC TGCACAGTCC AACTACTTCG CCCTGCGAAC GGTATGGATT CAATACAGCG GCGTACTGGC CATCGGCGCG ATGTCCGTGG CGATGATGTT GGCCACGCGC CCGGCGTGGC TGGAGCCCAG CTTGAACGGA CTGGACAAGA TATACCGCCT GCACAAGTGG CTCGGCATCG CTGCTCTGAC CGCTGCAACA GTACACTGGC TGTGGGCGCA GGGTACTAAA TGGGCCGTAG GCTGGGGCTG GCTGACGCGC CCCGCGCGCA AGCCCCGCGC AACGGCCGAT TCAATGGGCT CCATTGAATC GGCGCTGCGT GGCTGGCGTG GACTGGCCGA GGACTTGGGC GAATGGGCCT TCTACGCCGT CGCCGTGCTA CTGGTGCTGG CTTTGGTTAA GCGCTTTCCC TACCGGCTGT TCGCCAAGAC GCACCACTGG ATGGCAGCGA TCTACTTGGT GCTGGCCTTC CACACCTTGG TGTTGGTGCA GTTCTCCTAC TGGGCCCAGC CCGTGGGCTG GGCTTTGGCT ATGCTGCTGG CGAGCGGCAC GGTATCGGCG GTGTGGGTGC TGCTGGGCCG AGTCGGTGCG CAGCGCACCG CGCACGGTGT CATCGAATCG CTGCAGACCT ACCCTGCGCT GAACGTGCTG GAAACCACCC TGCGGATGGA CCCGGGCTGG CCCGGCCACC GGCCCGGACA GTTTGCCTTC GCCATGTCCA ACCCGAAAGA AGGCCCGCAC CCCTACACGC TAGCCTCAGC CTGGGTGCCG GAAGACCGGC GCATTACCTT CATCACCAAG GCGCTGGGCG ACCACACCCG CCGGCTGCCT GAGCGCCTAC GGGTAGGCGA CCAGGTAACG GTCGAGGGGC CTTACGGCTG CTTCACTTTC GACGACGAGA AGGCCCGCCA GATCTGGATC GGCGCCGGCA TCGGTATCAC GCCATTCATT GCGCGCATGA AGTATTTGGC GCAGCATAAA GGCCAAGACG CACGCCCGGT CGATTTGTTT CATCCTACGA GCGACGTTGA TCCGCAGGCC ATCGAGAAAC TGCGCGCCGA CAGCCAGGCG GCCGGCGTTG TGCTGCACCT GCTCATCGAC AAGCAGAACG GTCGCCTGAC GGGTGAACGC CTGCGTGCCA TGGTGCCGGG TTGGAAAGAC GCCAGCGTCT GGTTCTGCGG CCCCACGGCC TTCGGCCGCG CGTTGCGCGC CGACCTGCTG GCCCAGGGGC TCGAGCCGGA GGCGTTCCAC CAAGAGCTTT TCGAGATGCG CTGA
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Protein sequence | MKRIIWTFWF FALALSALWL FTDTLWPAQS NYFALRTVWI QYSGVLAIGA MSVAMMLATR PAWLEPSLNG LDKIYRLHKW LGIAALTAAT VHWLWAQGTK WAVGWGWLTR PARKPRATAD SMGSIESALR GWRGLAEDLG EWAFYAVAVL LVLALVKRFP YRLFAKTHHW MAAIYLVLAF HTLVLVQFSY WAQPVGWALA MLLASGTVSA VWVLLGRVGA QRTAHGVIES LQTYPALNVL ETTLRMDPGW PGHRPGQFAF AMSNPKEGPH PYTLASAWVP EDRRITFITK ALGDHTRRLP ERLRVGDQVT VEGPYGCFTF DDEKARQIWI GAGIGITPFI ARMKYLAQHK GQDARPVDLF HPTSDVDPQA IEKLRADSQA AGVVLHLLID KQNGRLTGER LRAMVPGWKD ASVWFCGPTA FGRALRADLL AQGLEPEAFH QELFEMR
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