| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2886 |
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| Symbol | lspA |
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| ID | 4039714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3141487 |
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| End bp | 3142023 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637978286 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_585028 |
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| Protein GI | 94311818 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0556168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0525619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATCGT CCACTCGTTC GACGCGTTCG ACGCCGGCCC GCGGCAAGAG CAAGGGCGCC
AGCGGCAACG TCACGCCGTG GCTGTGGATG GCCTTTGCCC TGCTGGTGGT GATGATCGAC
CAGTTCTTCA AGGTGGTGAT CACGCGCTCG TTCCAGTACG GCGAGTCGCG CCCGATCACC
AGCTTCTTCA ATCTGGTGCT GGTCTATAAC AAGGGTGCCG CGTTCAGCTT CCTGGCAGAT
GCGGGCGGCT GGCAGCGCTG GTTCTTCACG CTGCTGGGCG TGGTGGTCGG CGCGTTCATC
ATCTGGCTGC TCTATCGCCA TACCGGACAG AAGCTGTTTT GCCTGGCGGT ATCACTGATT
CTCGGTGGCG CCGTGGGCAA TGTGGTCGAC CGGATCATCC ACGGCCACGT GATCGACTTC
CTGGACTTCC ATCTGCGTAA CACGCATTTC CCGGCATTCA ACGTGGCGGA CTGCGCGATC
ACGCTCGGGG CGATCCTGCT GATCGTCGAC GAGCTGCGGC GCGTGCGACG TCACTGA
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| Protein sequence | MASSTRSTRS TPARGKSKGA SGNVTPWLWM AFALLVVMID QFFKVVITRS FQYGESRPIT
SFFNLVLVYN KGAAFSFLAD AGGWQRWFFT LLGVVVGAFI IWLLYRHTGQ KLFCLAVSLI
LGGAVGNVVD RIIHGHVIDF LDFHLRNTHF PAFNVADCAI TLGAILLIVD ELRRVRRH
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