| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1821 |
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| Symbol | |
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| ID | 4038623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1976611 |
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| End bp | 1977954 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977201 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_583969 |
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| Protein GI | 94310759 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.626552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00243652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTTTCG ACGCCCTGCT TGAACTGTTC GAGCAACGCA TCCCGGCCCA CCCGTGGGCA
CAGATCACCT TGTACGTCCT GGCGCTGGTC CTGCTGGCCG GCATCGCGCA ATGGCTCGTG
GCGCGCGTGG TCGGCCGGGT GGTCTATCGC GTATTGAGTC TTTCCGGCCA CGGCAACTGG
GCCGGGGCGC TGCTGCACCA CCGGACCTAT CGCCGGCTGG GCTACGCGGT ATTCCTGGCC
GTGGTCACGG TCGGCATCAG CCAGGTGCCG AACCTGGGTA AGTTCTCGGC GGCCATCGAG
CGGCTGGCTC ATGCCGGCAC CTGGATCAGC GTGTTCCTGA TGCTGTCTGG CGTGCTCGAT
GCGTGGCAGA CCGTGTTTTC CGGCAGCCGC AGCGCGCAGA CGCATTCGAT CAAGGGCTAC
ATCCAGGTGG CCCAGCTCGC GCTGTGGCTG GTCTGCGGTG TGCTGGTGCT GTCGATCCTG
ATCGACCGCT CGCCGCTCTG GATGCTGTCC GGTATCGGCG CGCTATCTGC GGTGCTGCTG
CTCGTGTTCA AGGACACGCT GCTGTCCCTG GTGGCCAGCA CGCAGCTCAC CTCGAACGAC
ATGCTGCGCA TTGGCGACTG GATCGAAATG CCCCAGTCCA ATGCCGATGG TTTCGTCATG
GACGTGGCGC TGCATACGGT CAAGGTCAAG AATTGGGACA ACACCGTGAC GACGGTGCCA
ACCTACAAGC TGTTCTCGGA GAGCTACCGC AACTACCGGC ACATGTTCGA GTCCGGCGCG
CGCCGCATCA AACGGACGCT CCGGATCGAT GCCACCAGCG TGCGGTTCCT GGACGAGGAG
GAGGTCAGGG CGCTGATGCG GTTCAAGCTG CTGCATGACT ATCTCGAGGT CAAGCAGGAG
GAGGTCGATC GGGCCAACCG GGAGATCCTG CGTGCCGACA CAGACCCGGT CAACCGCCGT
CGGCTGACCA ACCTGGGCAC GTTCCGCGCC TATGGCATCG CCTTCCTGCG CGCGCATCCG
GAAATTCATC ACGATCTGCT GCTGAACCTG CGGATGATGG AATCCGACTC GCAGGGCATT
CCGATCGAGA TTTACTGCTT TACCACGCTC ACGAACTGGA CGGACTACGA ACGTATCCAG
GGCGATATCT TCGACCACCT GTTCGCGATT CTGCCGGAGC TGGGTTTGCG GGTGTATCAG
GCGCCGTCAG GCGCGGACCT GAGCGGGCTG CGCAGCGGTG CGACGATGGC CGACCAGCAC
GCCGCACTGG CCGTGGCCGC CGCGGACTCG GGGATGCGCC AGCCGCCATC GGCCCCGACG
GATCGGGCCG ACAGGGTGGC TTAG
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| Protein sequence | MTFDALLELF EQRIPAHPWA QITLYVLALV LLAGIAQWLV ARVVGRVVYR VLSLSGHGNW
AGALLHHRTY RRLGYAVFLA VVTVGISQVP NLGKFSAAIE RLAHAGTWIS VFLMLSGVLD
AWQTVFSGSR SAQTHSIKGY IQVAQLALWL VCGVLVLSIL IDRSPLWMLS GIGALSAVLL
LVFKDTLLSL VASTQLTSND MLRIGDWIEM PQSNADGFVM DVALHTVKVK NWDNTVTTVP
TYKLFSESYR NYRHMFESGA RRIKRTLRID ATSVRFLDEE EVRALMRFKL LHDYLEVKQE
EVDRANREIL RADTDPVNRR RLTNLGTFRA YGIAFLRAHP EIHHDLLLNL RMMESDSQGI
PIEIYCFTTL TNWTDYERIQ GDIFDHLFAI LPELGLRVYQ APSGADLSGL RSGATMADQH
AALAVAAADS GMRQPPSAPT DRADRVA
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