| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1116 |
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| Symbol | |
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| ID | 4037914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1217577 |
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| End bp | 1218644 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976498 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_583271 |
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| Protein GI | 94310061 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00262553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACT CGCCCACGCT CACAGCCACC ACCTTGCCCT CTGCATCGAA CCCCTCCCAC
ACCAAGCCCG AACTACGCTA CCTGAGCCGC GACGACCTGA TCGCGCTGGG CGCGGGCCAC
TCCGATGCCT TCGTGCAAGC CATTACCGAA GGGCTCGCCA TCCACGCGCG CGGCGAGCAT
GTGCAGCCAC TCAAGCCCTA TCTGCGCTGG TCCGGCGCCG ACCATATCGC CGACCGCATC
ATCGCGATGC CCTGCTACAT CGGCGGCGAC AACCCAATCG CCGGCATCAA GTGGATCGGC
AGCCGCCAGC ACAACCCCGC GCGATTCGGC CTGGAGCGCG CCAGCGCGGT GATCGTGCTC
AACGACGCCA CCACCAACTA CCCGGTGGCG ATCATGGAAG GCGGCCTGAT CAGCGGCATG
CGCACCGCCG CCATCACGGC AGTGGCCACG CGGCATCTGG CGCGTAGCGG CTTCACCGAT
GTCGCCTGCA TCGGCTGCGG CCCGATCGCA CAGATGCAGA TGCAGACGCT CCTCGAGCAA
TTCCCGCAGA TCCGCGCCGT GCACCTGTTC GATCTCTCGC GCGACGCCAT GCATGCGATG
CGGTCGATGC TCGGCAGCCG CTTTCCCGCC GTGGGCTGGG AACTGTGCGG CAGCGCCGAA
CTGGCCGTAC GCGCCGCCGA CGTGGTGGTG ACCTGCACGG TCACCGATAC GCCGTACCTC
GAACACGCCT GGCTCAAGAC CGGCGCCTTC GTCTGCAACG TGTCGATCAT GGACGTGCAC
AAGGATGTTT ACGAGAAGGT CGACAAGGTG ATCGTCGACG ACTGGGACCA GTCCAACCGC
GAAAAGAAAA TCATCAACCA GCTTGTGCTC GAAGGCCGCT TCAGCCGCGA GCAATTGCAC
GCGGAACTGG GCGAGATCGT GATCGGCAGG AAGCCCGGCC GCGAGCGCGA CGACGAGATC
ATCCTGCTCA ATCCGATGGG CATGGCGCTC GACGACATGG TCTGCGCACG CCACTTCTAC
CACCTGGCGC TGGAACGCAA CGCCGGCACG CGCCTGCCGC TGCTATGA
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| Protein sequence | MTNSPTLTAT TLPSASNPSH TKPELRYLSR DDLIALGAGH SDAFVQAITE GLAIHARGEH
VQPLKPYLRW SGADHIADRI IAMPCYIGGD NPIAGIKWIG SRQHNPARFG LERASAVIVL
NDATTNYPVA IMEGGLISGM RTAAITAVAT RHLARSGFTD VACIGCGPIA QMQMQTLLEQ
FPQIRAVHLF DLSRDAMHAM RSMLGSRFPA VGWELCGSAE LAVRAADVVV TCTVTDTPYL
EHAWLKTGAF VCNVSIMDVH KDVYEKVDKV IVDDWDQSNR EKKIINQLVL EGRFSREQLH
AELGEIVIGR KPGRERDDEI ILLNPMGMAL DDMVCARHFY HLALERNAGT RLPLL
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