Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0682 |
Symbol | |
ID | 4037471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 754836 |
End bp | 755483 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637976057 |
Product | hypothetical protein |
Protein accession | YP_582837 |
Protein GI | 94309627 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00825878 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.45862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATATC ACCTGCCGTT CGATTTGCTG ATGGGGCGAC TGCCCCTGAT CCTGCACGTG ATGGAAGTGA TCGGCGTGCT GGCGTTCGCC GTCTCCGGCG TGGTCGATGC CCGCAAGCAG CGGCTGGATG TGGTCGGCAC CTTCGTCGTC GCGTTCGCCA CGGCATTTGG CGGCGGCACC TTGCGCGACG TGTTGCTCGA CCGCCGGCCC TTCTACTGGG TGGATCACGA GTACTACGTC CTGCTGATCT TCGTGATGTC GTTGGGCGCG TCTTTCGTTC TGCGCGTGGC TAGCCGGGTG GCGTCGGACC GCACCATGCT GGTGGCCGAC GCGATCGGGC TCGGATTGTT CTCGGTCACT GGCACGTCGC TGGCGCTGGT AGCGCAGATG ACGCCGACCG TAGCGGTGAT GATGGGCATC ATCTCGGCGG TGTTCGGCGG CGTGGTGCGT GACGTGCTCT GCAACGAGGT GCCGATGATC CTGCGCGATC GCTCGCCGTA TGCCACCTGT TCGTTCGTCG GCTGCTGGAT CTACGTGGGG CTGACCTGGC TGCGTGCCGA CCAGGAGGTG GCGCTGCTGG CCGGCGCGCT GGTCACGATG GGAATGCGGC TGGTGTCGGT GCAGTTTGGC TGGAAGCTGC CGAGCTAG
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Protein sequence | MQYHLPFDLL MGRLPLILHV MEVIGVLAFA VSGVVDARKQ RLDVVGTFVV AFATAFGGGT LRDVLLDRRP FYWVDHEYYV LLIFVMSLGA SFVLRVASRV ASDRTMLVAD AIGLGLFSVT GTSLALVAQM TPTVAVMMGI ISAVFGGVVR DVLCNEVPMI LRDRSPYATC SFVGCWIYVG LTWLRADQEV ALLAGALVTM GMRLVSVQFG WKLPS
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