Gene Rmet_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0507 
Symbol 
ID4037296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp537781 
End bp538773 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content68% 
IMG OID637975882 
Producttranslation factor SUA5 
Protein accessionYP_582662 
Protein GI94309452 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.160879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAC GTATGCCCAC CGCCGCGGAG CTGGACGAAG CCGTCCGCCT GCTCGAAGCC 
GGCGAGCTGG TGGCCTTCCC GACCGAGACC GTCTACGGTC TCGGTGCCGA TGCCGAGAAT
CCTGAAGCCG TGGCGCGTAT CTTCGCCGCC AAGGGCCGTC CGTCGAACCA TCCGGTGATC
GTTCACGTGG TCGATGGCGC CGATGTCGGC TACTGGAGCG ACGACGTACC CGAAGCCGCG
CAGAAGCTGA TCGATGCGTT CTGGCCCGGT CCGCTGACGA TCATCCTGAA ACGCGCCGCC
CACATCCCGG CAGCGGTTGC CGGTGGGCAG GACAGCATCG GCTTGCGCTG CCCGTCGCAT
CCGGTGGCGC AGGCACTGCT GTCGCGCTTC CGCCGTGGCC GGGGTGGCAT TGCTGCGCCA
TCGGCCAACA AGTTCGGCCA GGTCAGCCCG ACCACGGCCG AGCATGTGCG CGACGAGTTC
GGTGGATCGG TCTATGTGCT CGAAGGCGAT GGCGTGGACG TTGGCATCGA ATCGTCGATC
GTCGATCTGT CCCGCCTGGA TACGGCTGGC CCGGTGCTGC TGCGCCCGGG CGCGATCACG
GCGGCGATGA TGGCCGACGT GCTCGGCACC ATGCCGCTAC CGCCGGACGC CGCCGCGCCG
CGCGCGTCGG GCACGCTCAA GGCCCATTAC GCGCCCCGCA CCACGCTGAC GCTGGCCCAG
GCCGATGCCT TGCCGCAGTA CCTGCATGGG CTGTCCGCCG ATGGCAGGCT GGCTTGGGTG
GGTCGCGCGC CGGCAACCAG CGATCCGCGC TGCACGTTCG TTGAAGCACC GGCCACGCCG
GATGCTTACG CGCAGGAGTT GTACCGGCTG TTGCGCCGGC TCGACAAGGA AGGATTCCAG
CGGCTGGTGT TCGAACCCTT GCCGGAGAGT CTCGAATGGG ACGGGGTGCG GGACCGGTTG
GGTCGCGCCG CGGCTGCGTT CGAGGATTGC TGA
 
Protein sequence
MSSRMPTAAE LDEAVRLLEA GELVAFPTET VYGLGADAEN PEAVARIFAA KGRPSNHPVI 
VHVVDGADVG YWSDDVPEAA QKLIDAFWPG PLTIILKRAA HIPAAVAGGQ DSIGLRCPSH
PVAQALLSRF RRGRGGIAAP SANKFGQVSP TTAEHVRDEF GGSVYVLEGD GVDVGIESSI
VDLSRLDTAG PVLLRPGAIT AAMMADVLGT MPLPPDAAAP RASGTLKAHY APRTTLTLAQ
ADALPQYLHG LSADGRLAWV GRAPATSDPR CTFVEAPATP DAYAQELYRL LRRLDKEGFQ
RLVFEPLPES LEWDGVRDRL GRAAAAFEDC