Gene Rmet_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0181 
Symbol 
ID4036966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp187838 
End bp189034 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content67% 
IMG OID637975553 
Producthypothetical protein 
Protein accessionYP_582336 
Protein GI94309126 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.301836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAG TCGCTAGTCT ACCCCTTCCC TCCGCAGATG CGCTGGACGC CTCCGCGGCC 
CTTTCCATCT GTATTGCCGG CGCCATCGAC GCAGCGGGCG GCTGGATCGG CTTCGACCGA
TTCATGTCGC TGGCACTCTA CGCCCCCCGG CTGGGCTACT ACAGTGGCGG TGCGGCCAAG
TTCGGCCGCG ACGTCAACGA CGGCAGCGAC TTCATCACCG CCCCCGAACT GACACCATTC
TTTGCTCGCA CGCTGGCACG CCAGTTCGCG CCGCTGGTCA GAATGAACCT GCCGCGGGTC
ATGGAATTCG GCGCGGGCAC CGGCCGGCTC GCCGCCGACC TGCTGCTCGC GCTCGAAACC
GAGGATGCGC TGCCAGACAC CTACCAGATC GTTGAACTGT CCGGTGAACT GCGCGCGCGC
CAGCAGGCCA CGCTGGACCA GCGGGCCCCG CATCTGGCCG GGCGCGTCAC CTGGCTGGAC
GCCCTGCCGG ACCGCTTCGA GGGTGTGGTG GTCGGCAACG AAGTGCTCGA TGCAATGCCG
GTGCGCCTCT ACGCGCGTAC TGGCGGCCGC TGGCACGAGC GTGGCGTGGT CTGCGCGAAG
GATGGAAAGG CGGGCGCCGA GGCCTTCGCC TTCGAAGACC GGCCATTGGA GGACGGCGCG
ATCCCTGCGG TACTGCTCGG GATTCCGGGC GACCACGACA TCGTCACCGA GACCCATACC
GAAGCGGAAG GATTCACCCG CGCCGTGGGC GCGCTGCTGG CGCGCGGCGC AGCGTTCTTT
ATCGACTATG GCTTCCCGGC GTCCGAGTAC TACCATCCGC ACCGTACCGG CGGCACGCTG
ATGTGCCATT ACCGTCATCA CGCCCACCCC GATCCGTTCC TCTACCCCGG ACTGCAGGAC
ATCACCGCGC ACGTGAATTT CAGCGGGATC GCCCAGGCGG GCGTGGAGGC AGGCCTGCAA
GTGTCCGGCT ACGCCTCGCA GGCGCGCTTC CTGATGAATG CCGGCATCAC GGAACTTATG
ATGTCGCTCG ACCCGAGCGA TGCCCGCGCG TTCCTGCCGC AGGCCAATGC GGTGCAGAAA
CTGTTGTCGG AAGCTGAGAT GGGTGAGCTG TTCAAGGTCA TCGCCCTCAC CCGCGGCATC
GACGACGCCA TGCCGCTCGA CGGCTTCGCG CGCGGCGACC GCAGCTTCGC ACTCTAA
 
Protein sequence
MQKVASLPLP SADALDASAA LSICIAGAID AAGGWIGFDR FMSLALYAPR LGYYSGGAAK 
FGRDVNDGSD FITAPELTPF FARTLARQFA PLVRMNLPRV MEFGAGTGRL AADLLLALET
EDALPDTYQI VELSGELRAR QQATLDQRAP HLAGRVTWLD ALPDRFEGVV VGNEVLDAMP
VRLYARTGGR WHERGVVCAK DGKAGAEAFA FEDRPLEDGA IPAVLLGIPG DHDIVTETHT
EAEGFTRAVG ALLARGAAFF IDYGFPASEY YHPHRTGGTL MCHYRHHAHP DPFLYPGLQD
ITAHVNFSGI AQAGVEAGLQ VSGYASQARF LMNAGITELM MSLDPSDARA FLPQANAVQK
LLSEAEMGEL FKVIALTRGI DDAMPLDGFA RGDRSFAL