Gene Rmet_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0178 
Symbol 
ID4036963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp185640 
End bp186329 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID637975550 
Productglutathione S-transferase-like protein 
Protein accessionYP_582333 
Protein GI94309123 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.413822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG TCATCGGCAA CAAGAACTAC TCTTCCTGGT CGCTGCGCCC CTGGCTGTTG 
CTGCGCCACG CCGGCATTGC CTTCGAGGAA ATCGCGGTAC GTCTGTTCAC AAAGGAGTTC
GCGGCCGAGA TCGCGCGTTA TTCGCCGGCT GGCAAGGTGC CGGCGCTGAT CGATGGCGAC
GTGACCGTAT GGGATTCGCT GTCGATCAGC GAATATGTCG CCGAACGCTT TCCGGAGAAG
GCCCTGTGGC CGAAGGACGC CGCCGCGCGC GCGCTGGCGC GTTCGATCTG CGCCGAGATG
CATTCCGGGT TTGGCAACCT GCGCAGCCAG ATGCCGATGA ACGTGACGGC AATGCTGCCG
GGGCTGGGCT GGAACGTCGC CGTGCAGCGT GACATCGACC GCATCGCGTC GATCTGGACC
GATCTTCGCA CGCGCTACGC GTCCGAAGGT CCGTTCCTGT TCGGCAGCTT TACGATTGCC
GACGCGTTCT ACGCGCCGAT AGTCAGCCGC TTTGCCACCT ACGGCGTGCA TCTGCCCGAA
TCCGCCAAGG CGTACGCGGA CTTCGTGCTG GCGCTGCCCG CGATGCAGGA ATGGGCGGCG
GCGGCACGCG AGGAACGGGA CTTTGTCCCG GCCGATGAAC CGTATCGCAC CGAGCCGGAT
CGTCCGGACG CGATCATCGT TTCGGGTTGA
 
Protein sequence
MKLVIGNKNY SSWSLRPWLL LRHAGIAFEE IAVRLFTKEF AAEIARYSPA GKVPALIDGD 
VTVWDSLSIS EYVAERFPEK ALWPKDAAAR ALARSICAEM HSGFGNLRSQ MPMNVTAMLP
GLGWNVAVQR DIDRIASIWT DLRTRYASEG PFLFGSFTIA DAFYAPIVSR FATYGVHLPE
SAKAYADFVL ALPAMQEWAA AAREERDFVP ADEPYRTEPD RPDAIIVSG