| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6343 |
|---|
| Symbol | tnpR |
|---|
| ID | 4036781 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007972 |
|---|
| Strand | + |
|---|
| Start bp | 30864 |
|---|
| End bp | 31229 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 637975369 |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.00153722 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000047635 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGTAG GTTACATGCG CGTGTCGTCG GACTCCGACC GCCAGAGCAC GAACTTGCAG
CGCGATGCGC TGCTCGCCGT CGGCGTCGAT GCGCGGCATC TGTTCGAGGA TCATGCTTCC
GGCGCGAAGG ACGACCGCGC GGGCCTGGCG CGGGCGCTCG AATTCGTTCG CCCTGGCGAC
GTGTTGGTCG TGTGGAAGCT CGACCGGCTC GGCCGTTCGT TGTCGCACTT GCTCGCCATC
GTGACCTCGC TCAAGAAAAA GCAGGTGGCG TTCCGCTCGC TGACGGAGAA CCTGGATACC
ACGACGCCCT CGGGCGAGTT TCTGTTCCAG GGGTCGTCTC AGAAAACGGA AAATAAAGCA
CGCTAA
|
|---|
| Protein sequence | |
|---|
| |