Gene Pcryo_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1618 
Symbol 
ID4035768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1990596 
End bp1990847 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content40% 
IMG OID637974083 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_580879 
Protein GI93006442 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.939169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0191928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACT TAAATATAGC ACAACCATTT ATTGAGCAAT GCAACCATAT TCCTCAGCTA 
CTTAGCCTCA AAGCCGTTAA AGAATATACA GGTATCAGCC GCTCGACTAT CTATGCAATG
GCCGATGTAA ATTCTGCTCA ATATGATCCA ACGTTCCCTA AAAAGGTGCA ACTGACACAA
GTGAGGGTAG CTTGGGTAGC AAGTGAGATT GCAGAGTGGA TTAATGAAAA AATTGAAGCA
AGATCAGCTT AG
 
Protein sequence
MENLNIAQPF IEQCNHIPQL LSLKAVKEYT GISRSTIYAM ADVNSAQYDP TFPKKVQLTQ 
VRVAWVASEI AEWINEKIEA RSA