Gene Pcryo_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0254 
Symbol 
ID4034111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp300431 
End bp301366 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content45% 
IMG OID637972703 
ProductAraC family transcriptional regulator 
Protein accessionYP_579522 
Protein GI93005085 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.215368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.68568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAT TAAGCGTGTT ACTACAAAAT GTACATTTAT TCGATACGAA ATACTATCGC 
TTAAATGGTA CAGGCAATTG GTCTTACTCA CTCACTAGAC AAGATACGAT TGTGTTTTAT
TTGGTGATGT CTGGTAGCTT TTGTATTGAT ATGGGCAGTG GACTCAGAGA AGCGCATGCT
GGCGACATTA TTATGATTCC TAGCGCGCAC AATCATGTCA GTTACGCGCT CAACCATCAT
GGTGAGAGTG CCAAACCTTT GGATGAGTTG CTTACTAATT GCACGGAACA AGTGCTTGAT
ATTCAGGGCG ATGGTGATGC CCAATCATCT TTGATACTGA TTGAATGCAA GTACGATAAA
GAGATGATTC GTCCTTTATT ATCAGTGCTA CCAACGATAT TGCCTGAAAT TAACGATGAA
TCTGATGGTC GGTTCGAGGT GATTGATGTT GAGATTCGAC TGCTGACGTT AGAAGCTGAG
CATGAGCGGA TGGGTAAGAC GGCGATTATC AATCATTGGG CAAGTATTAT GATGATTGAG
TGTTTGCGGG TTTATATCGA AAGTTTGCCT GAAGCCACGG ACAGTTGGCT AAAAGCCATG
AAAGACCCGT TTTTAACCAA GGCATTGGTC GCCATGCACG AAAATCCAAG CCAGAACTGG
AGCATTCATG AGCTTGCTGA AGTTGCAGGT ATGTCACGCT CGAGTTTTGC GCAGCGTTTC
AAAGACGTGG TTGGTATGCC GCCGTTGACC TATCTGATTG ACTACCGTTT GCGTCTGGCG
GCACGTTATT TGCGCTTGCA GCAAAATAGT ATCAGCCGTA TTAGTGAGCT AGTGGGCTAT
GCCTCAGACT CAACCTTTAG CCAAGCCTTT AAGCGCGTGT ATGGCATATC GCCAAAAGCG
TACCGCCAGC AATATCAAAA ACAAAACCTT GCTTAG
 
Protein sequence
MDALSVLLQN VHLFDTKYYR LNGTGNWSYS LTRQDTIVFY LVMSGSFCID MGSGLREAHA 
GDIIMIPSAH NHVSYALNHH GESAKPLDEL LTNCTEQVLD IQGDGDAQSS LILIECKYDK
EMIRPLLSVL PTILPEINDE SDGRFEVIDV EIRLLTLEAE HERMGKTAII NHWASIMMIE
CLRVYIESLP EATDSWLKAM KDPFLTKALV AMHENPSQNW SIHELAEVAG MSRSSFAQRF
KDVVGMPPLT YLIDYRLRLA ARYLRLQQNS ISRISELVGY ASDSTFSQAF KRVYGISPKA
YRQQYQKQNL A