Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0254 |
Symbol | |
ID | 4034111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 300431 |
End bp | 301366 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637972703 |
Product | AraC family transcriptional regulator |
Protein accession | YP_579522 |
Protein GI | 93005085 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.215368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.68568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCAT TAAGCGTGTT ACTACAAAAT GTACATTTAT TCGATACGAA ATACTATCGC TTAAATGGTA CAGGCAATTG GTCTTACTCA CTCACTAGAC AAGATACGAT TGTGTTTTAT TTGGTGATGT CTGGTAGCTT TTGTATTGAT ATGGGCAGTG GACTCAGAGA AGCGCATGCT GGCGACATTA TTATGATTCC TAGCGCGCAC AATCATGTCA GTTACGCGCT CAACCATCAT GGTGAGAGTG CCAAACCTTT GGATGAGTTG CTTACTAATT GCACGGAACA AGTGCTTGAT ATTCAGGGCG ATGGTGATGC CCAATCATCT TTGATACTGA TTGAATGCAA GTACGATAAA GAGATGATTC GTCCTTTATT ATCAGTGCTA CCAACGATAT TGCCTGAAAT TAACGATGAA TCTGATGGTC GGTTCGAGGT GATTGATGTT GAGATTCGAC TGCTGACGTT AGAAGCTGAG CATGAGCGGA TGGGTAAGAC GGCGATTATC AATCATTGGG CAAGTATTAT GATGATTGAG TGTTTGCGGG TTTATATCGA AAGTTTGCCT GAAGCCACGG ACAGTTGGCT AAAAGCCATG AAAGACCCGT TTTTAACCAA GGCATTGGTC GCCATGCACG AAAATCCAAG CCAGAACTGG AGCATTCATG AGCTTGCTGA AGTTGCAGGT ATGTCACGCT CGAGTTTTGC GCAGCGTTTC AAAGACGTGG TTGGTATGCC GCCGTTGACC TATCTGATTG ACTACCGTTT GCGTCTGGCG GCACGTTATT TGCGCTTGCA GCAAAATAGT ATCAGCCGTA TTAGTGAGCT AGTGGGCTAT GCCTCAGACT CAACCTTTAG CCAAGCCTTT AAGCGCGTGT ATGGCATATC GCCAAAAGCG TACCGCCAGC AATATCAAAA ACAAAACCTT GCTTAG
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Protein sequence | MDALSVLLQN VHLFDTKYYR LNGTGNWSYS LTRQDTIVFY LVMSGSFCID MGSGLREAHA GDIIMIPSAH NHVSYALNHH GESAKPLDEL LTNCTEQVLD IQGDGDAQSS LILIECKYDK EMIRPLLSVL PTILPEINDE SDGRFEVIDV EIRLLTLEAE HERMGKTAII NHWASIMMIE CLRVYIESLP EATDSWLKAM KDPFLTKALV AMHENPSQNW SIHELAEVAG MSRSSFAQRF KDVVGMPPLT YLIDYRLRLA ARYLRLQQNS ISRISELVGY ASDSTFSQAF KRVYGISPKA YRQQYQKQNL A
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