Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0037 |
Symbol | |
ID | 4034866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 44201 |
End bp | 45376 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637972477 |
Product | ornithine decarboxylase |
Protein accession | YP_579305 |
Protein GI | 93004868 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAAAA TCGACCAATA TTTTGACCCT GCCGGCTGGC AGAAGTTTAC TAAAGCGGCT GAAGGTCGTG AAACGCCATT TTTGGTGGTT GATCTTAATC GCATTAAAAT AAAATATCAT GAAATGGTTG GTTTTTTTCC TCATGCTAAA ATCCATTATG CGATGAAAGC AAGCCCTGCT GTCGAAGTCA TCAATCTGCT TGCTGAGCTT GGTTCAAACT TTGACTGTGC ATCGATTTAT GAGCTTGATC GCGTGCTTGA CTGCGGCGTT GAGCCCTCAC GTATCTCTTA TGGTAATACC ATCAAAAAGC CTGAACATGT CAAATACGCC TTTGAAAAAG GGGTTGATTT GTATGCGACC GACTCAGAAG CAGATTTAAA AAACATTGCA AAACATGCAC CTGGCTCAAA AATATTTGTA CGTATCTTAG TACAAGGGTC AGATACCGCT GAATGGCCAT TATCACGCAA ATTTGGTTGT CACCCCAATA TGGCGATTGA ACTATTGATT CAAGCGCAAG AATTGGGCTT GGTACCTTAT GGCATCTCAT TCCATGTGGG CAGTCAGCAA AAAGACGTTG CCGCTTGGGA TGATGCTTTA GCCAAAGTTA AATATATGTT TGATTGGATG AAGAACGAAG AAGGCATAAA GCTTCAAATG ATAAATTTGG GTGGCGGCTT TCCGGCAAAC TATCTGAGCG AAGTCAATCC TATCAAAGTC TATGCTGAAG AGATTCAAAG CTACTTAAGC GATGACTATA GTGCTGAAGA TATGCCAGAG ATTATTTTAG AGCCCGGTCG TTCATTGGTT GGCGGTTCAG GCGTACTGGT TAGTGACGTG GTATTGATTT CTCGTAAATC GCATACTGAT CTGACACGTT GGGTCTATAC CGATGTGGGT TTATTTCAAG GTTTAATTGA AACCTTAGGT GAAGCTATCA AGTACCCCGT TTATACACCT AAAATGGAAA CCTCAACCAG CGCGGGTACG GTGGTATTAG CAGGTCCTAC TTGTGACTCA ACTGATATCA TGTATGAAGA GGCAGGTTAT CAGCTACCAG AAGAGCTGGA GATTGGTGAC AAGATATTTT GGTTAACTAC GGGTGCTTAT ACCAACTCGT ACTCATCTAT TGAGTTCAAT GGTTTTCCAC CGTTAGAAGT GGTCTATGTT GACTAA
|
Protein sequence | MIKIDQYFDP AGWQKFTKAA EGRETPFLVV DLNRIKIKYH EMVGFFPHAK IHYAMKASPA VEVINLLAEL GSNFDCASIY ELDRVLDCGV EPSRISYGNT IKKPEHVKYA FEKGVDLYAT DSEADLKNIA KHAPGSKIFV RILVQGSDTA EWPLSRKFGC HPNMAIELLI QAQELGLVPY GISFHVGSQQ KDVAAWDDAL AKVKYMFDWM KNEEGIKLQM INLGGGFPAN YLSEVNPIKV YAEEIQSYLS DDYSAEDMPE IILEPGRSLV GGSGVLVSDV VLISRKSHTD LTRWVYTDVG LFQGLIETLG EAIKYPVYTP KMETSTSAGT VVLAGPTCDS TDIMYEEAGY QLPEELEIGD KIFWLTTGAY TNSYSSIEFN GFPPLEVVYV D
|
| |