Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3215 |
Symbol | |
ID | 4031994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3541414 |
End bp | 3542424 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637971628 |
Product | farnesyltranstransferase |
Protein accession | YP_578410 |
Protein GI | 92118681 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.153645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGGTCA TTGTCCCATT CGAAAGCCAC TCGACAGGCT CCATCGACCA GATCGTCGAG CTCGTCGCCG CCGACATGGA ACGCGTCAAC GCCACTATCC TGTCGCGGAC CGGGTCGGAC GTCACGATGA TCCCGGAAGT CGCCAACCAC CTGATCTCGT CCGGCGGCAA GCGGCTGCGC CCGATGCTGA CGCTGGCGAT GGCCCATCTC GCCGGCTATT CCGGCGAAGG CCACATCAAG CTCGCGGCCT CCGTGGAATT CATGCACACC GCGACGCTGC TGCATGACGA CGTAGTCGAC GAGAGCGAGC TGCGCCGCGG CAAACTGTCG GCGCGCATGG TGTGGGGCAA CGAGGCCAGC GTTCTCGTCG GCGACTTTCT GCTCGGACAG GCGTTCCGCA TGATGGTCGA GGTCGGCTCG CTGCGCGCGC TCGACATCCT GTCGGCGGCG GCGGCCACCA TCGCCGAGGG CGAGGTCATG CAGCTTGCGG CGGCGAAGAA TACGGCCACC ACCGAGGACG AATACCTCGC GGTCATCCGC GGCAAGACCG CAGAGCTGTT CGCCGCCGCC TGCGAGGTCG GTCCGGTGCT CGGCGGTCGT CCGAAGGCCG AGGAAATGGC GGCAGCCAGC TTCGGCATGA ACCTCGGCAT CGCCTTCCAG CTCGTCGACG ATGTGCTCGA CTATGGCGGC AAGTCGGCAA AGCTCGGCAA GAACATCGGC GACGATTTCC GCGAGGGCAA GATCACGCTG CCGGTGGTGC TGGCGTTCCG CCGCGGCAAC GATATCGAAC GGGAATTCTG GGTGCGAGCG CTCGAGCAAG GCGAGATCGG CGACAACGAC CTCAATCACG CCATCGGGTT GATGACCAAG CATCGCGCGT TGGAGGATAC CCTCAACCGC GCCCAGCACT ACGGCGCGAT GGCGGTCGAT GCGCTGGCGC TGTTTCCGCC GTCGCCGATG AAGAGCGCCC TGGAGCAGGT CGTGGCGTTC TGCCTGGCGC GGTCGCACTA A
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Protein sequence | MAVIVPFESH STGSIDQIVE LVAADMERVN ATILSRTGSD VTMIPEVANH LISSGGKRLR PMLTLAMAHL AGYSGEGHIK LAASVEFMHT ATLLHDDVVD ESELRRGKLS ARMVWGNEAS VLVGDFLLGQ AFRMMVEVGS LRALDILSAA AATIAEGEVM QLAAAKNTAT TEDEYLAVIR GKTAELFAAA CEVGPVLGGR PKAEEMAAAS FGMNLGIAFQ LVDDVLDYGG KSAKLGKNIG DDFREGKITL PVVLAFRRGN DIEREFWVRA LEQGEIGDND LNHAIGLMTK HRALEDTLNR AQHYGAMAVD ALALFPPSPM KSALEQVVAF CLARSH
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