Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3090 |
Symbol | |
ID | 4030414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3414697 |
End bp | 3415302 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637971505 |
Product | nuclease (SNase-like) |
Protein accession | YP_578287 |
Protein GI | 92118558 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.906098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAACCG TTGGGCCAGC CAACGCGGCT AAGCTCGATG CCATGTCTAA GCCATTCATC TTCGCCAGAG AGCGCCACTT CCTCGGGATC ACCGAACGAC GGTGGCAATG GATAGGTAGA CGCACGCTAA TCGCGGCCGG TCTTATCGCC TGGGGATTTG CAGCGTATCA GTTCGGAGCA CAGCGCGGCA TGGCTCTAGT GTCGAGTACA TGGGACAGCT TGCGCTTGAA CATTCTCGGC ACGAGCGCAC CTATCAAGGT CGATGCCATT CGATCGATGC CGGCGTGCTT TGGCCCGGTA CGGTTCAACT GCGTCGTTGA TGGCGACACG GCCTGGGTAG ACAGCGAGAA AATCAGGATA AGCGGGATCG ATGCGCCCGA GATTGACGGG AAGTGCCCCT ATGAGCGCGT CCTGGCACAA CGTGCGAAAT CCCGCCTGAG CGAATTGCTA TCCGCGGAGC CGTTCTCGGT GTCACGCTCC GGCACTGATC GGTATGGGCG CACGTTGGCG ACAGTCTATC TCCGAGACAG AGGCGATGTT GGTTTGGTGC TGGTGCGGGA TGGGCTGGCG CGGGTTTGGA GCGGCCGACG CATGCCGTGG TGTTGA
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Protein sequence | MLTVGPANAA KLDAMSKPFI FARERHFLGI TERRWQWIGR RTLIAAGLIA WGFAAYQFGA QRGMALVSST WDSLRLNILG TSAPIKVDAI RSMPACFGPV RFNCVVDGDT AWVDSEKIRI SGIDAPEIDG KCPYERVLAQ RAKSRLSELL SAEPFSVSRS GTDRYGRTLA TVYLRDRGDV GLVLVRDGLA RVWSGRRMPW C
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