| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2891 |
|---|
| Symbol | |
|---|
| ID | 4033197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 3185784 |
|---|
| End bp | 3186800 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637971337 |
|---|
| Product | glycine oxidase ThiO |
|---|
| Protein accession | YP_578119 |
|---|
| Protein GI | 92118390 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.894969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAGA ATACGCGAGA GATATGGGGG GATTCTCCCG TCGCGGTGAT TGGCGCAGGC
ATCGCCGGCG CGTGGCAGGC GTTGCTGTTC GCGAAAGCCG GGTACGCCGT CACGCTTCAC
GAGCGCGGCA GCGACGCGAT GACGCAGGCC ACCAGCCACT GGGCCGGCGG CATGCTGGCG
CCATGGTGCG AATCTGAGGT GTCCGAACCC CTCGTCACGC GTCTCGGCCT TCGCTCGCTC
GCGCTGTGGC GCGAACACGT TCCCGATACG CCTTTCAACG GGTCGCTGGT GGTGGCGCAT
CCGCGCGACC GCTCCGACTT CGAGCGTTTT GCGCGCATGA CATCGGGGCA TCAGCGCATT
CAGGGCGATA AAGTGAGCGA GCTTGAACCA TCGCTCGACG GACGATTTCG CGAGGCGCTG
TTCTTCCCGC ACGAAGGCCA TGTCGAGCCG CGCCGCGTGC TGCCGCAATT GCACGCCCGC
ATTCGCGCCG CCGGCGGCAA AATCGAATTT GACAGCGCGC CGGATGCCCG CCACCTCGAC
GGAATGGCGA TCGATTGCCG CGGCCTTGCC GCGCGCGACA CGTTCCCGGA CCTGCGCGGC
GTCAAGGGCG AGGAGATCAT CGTCGAAACC GACGAGATTG CGCTGTCGCG CCCGGTGCGG
CTGCTGCATC CGCGCTGGCC GCTCTACATC ATTCCGCGCG AGGACAACCG CTTCATGATC
GGCGCCACCT CGATCGAACG CGAGGACGAC GGCGTCAGTG TCCGCTCGGC GCTTGAGCTG
CTCAGCGCGG CTTACGCTGT GCATCCGGCC TTCGGCGAAG CGCGGATCGT GGAGATCGGC
GCAGGTCTGC GGCCCGCGTT TCCCGACAAC CTGCCGCGCA TCGCGATCGA CAAGAACCGC
ATCGCGGTCA ACGGACTTTT TCGCCACGGC TTTCTGCTGT CGCCGGCGCT CGCGGAGCTG
ACGCTCGCTT ACGTCGCACG CGGCGAGATC GACAACGAGG TGATGCAATG CGAGTGA
|
|---|
| Protein sequence | MFQNTREIWG DSPVAVIGAG IAGAWQALLF AKAGYAVTLH ERGSDAMTQA TSHWAGGMLA
PWCESEVSEP LVTRLGLRSL ALWREHVPDT PFNGSLVVAH PRDRSDFERF ARMTSGHQRI
QGDKVSELEP SLDGRFREAL FFPHEGHVEP RRVLPQLHAR IRAAGGKIEF DSAPDARHLD
GMAIDCRGLA ARDTFPDLRG VKGEEIIVET DEIALSRPVR LLHPRWPLYI IPREDNRFMI
GATSIEREDD GVSVRSALEL LSAAYAVHPA FGEARIVEIG AGLRPAFPDN LPRIAIDKNR
IAVNGLFRHG FLLSPALAEL TLAYVARGEI DNEVMQCE
|
|---|
| |