| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2112 |
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| Symbol | |
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| ID | 4031942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2355097 |
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| End bp | 2356287 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970570 |
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| Product | ribonuclease D |
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| Protein accession | YP_577369 |
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| Protein GI | 92117640 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGGCG ACAAGGGTAA AAAGACGGGC TATGGAGCGC TCATGGACCT GATCACGACC
ACCGCGGAAC TGGCTTCCGT CTGCGCTCGC CTCGCCAACT ACCCAGTTGT CACCGTCGAT
ACGGAGTTCC TCCGCGAGAC CACCTACTAC CCCCTGCTCT GCGTGGTCCA GATGGCGAGC
CCGGACGAAG CCGTGGTGGT CGATGCTCTC GCCGAGGGAA TCGACCTGAA GCCCTTTTTC
GACCTGATGT CGAACGAGCG CGTCCTGAAG GTCTTTCACG CCGCCCGCCA GGACATTGAA
ATCGTCTGGC ATCAGGCCGG CATCATTCCG CACCCGATCT TCGATACGCA AGTGGCTGCC
ATGGTGCTCG GATATGGCGA TTCCATCGCC TATGACGCGC TGGTCGAGCG CGTCAACGGA
CACCGCCCGG ACAAGACCCA TCGCTTCACC GACTGGTCGC GCCGGCCTCT GACCAAGGAC
CAACTCGAAT ACGCGGTCGC TGACGTCACC CATCTCCGTG ATGTCTTTGC CGCCCTTGAT
GCCGACCTCA AGAAGCGCGG CCGCGGCGAC TGGGTCAGCG AGGAAATGGA GGTTTTGACC
TCGCCGAAAA CCTACGACTT CCACCCCGAA CGCGCCTGGG AGCGGTTGAA GACCCGGGTT
CGCAAGCCGA AGGATCTCGC CGTCATGATG GAAGTGGCGG CCTGGCGCGA ACAGGAAGCC
CAGAGCCGGA ACATTCCGCG ATCGCGCGTG CTGAAAGACG ACGCCGTTGG CGATATCGCG
ATCCATGCAC CAGCAACCCC GGAGCGGCTG GCAACGCTGC GCTCGCTGCC GAAAGGTTTT
GAAAAATCGC AGTGGGGCGC CGACATTGTC GCAGCGGTCC AGCGCGGTCT CGCCCGAGAC
CCGCGCGAGT TGCCCAAGAT CGAGAAACCG CGAAACAATA CCAACGGCGC CGCCACGGTG
GAGCTTCTCA AGGTTCTTCT GCGTATGACA TCCGAGCGCC ATGCCGTCGC CAGCAAGGTG
ATCGCGACCG TGGACGATCT CGAGCGGATC GCCGCGGATG ACGCGGCCGA CGTTGGTGCG
CTGCGCGGCT GGCGGCGCGA ACTGTTCGGC GAGGCCGCGC TCGCGCTGAA GCATGGCCAG
CTGGCATTGG CGATCGAAAA GGGCCGCGTT GTGCGCGTGG AGCGAAGCTG A
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| Protein sequence | MRGDKGKKTG YGALMDLITT TAELASVCAR LANYPVVTVD TEFLRETTYY PLLCVVQMAS
PDEAVVVDAL AEGIDLKPFF DLMSNERVLK VFHAARQDIE IVWHQAGIIP HPIFDTQVAA
MVLGYGDSIA YDALVERVNG HRPDKTHRFT DWSRRPLTKD QLEYAVADVT HLRDVFAALD
ADLKKRGRGD WVSEEMEVLT SPKTYDFHPE RAWERLKTRV RKPKDLAVMM EVAAWREQEA
QSRNIPRSRV LKDDAVGDIA IHAPATPERL ATLRSLPKGF EKSQWGADIV AAVQRGLARD
PRELPKIEKP RNNTNGAATV ELLKVLLRMT SERHAVASKV IATVDDLERI AADDAADVGA
LRGWRRELFG EAALALKHGQ LALAIEKGRV VRVERS
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