Gene Nham_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2023 
Symbol 
ID4031404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2248011 
End bp2248364 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content58% 
IMG OID637970480 
ProductHNH nuclease / phage phi-105 holin-like protein 
Protein accessionYP_577281 
Protein GI92117552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.163439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTTG CAGCGCCACG CCTATGCACC TGTGGCCGGG TCGTACCAGC CGGCAAGCGG 
TGCGAATGCT CCATCAAACG GAAGGCAGAG CGTGACAAGC TTAGACCTGC GGCACCGCAG
CGAGGATACG ATGCCGAGTG GCGTCGGTTG TCTAAGGCGT ATCTCGCAGA GACTGGCAAT
GATGTATGCG CGGATTGTGG TCGGCCTGCC GTACTGGTCG CGCATCGGGT GAGTATCCGT
AAAGCACCGC ACTTACGCCT TGTGCGGAGC AACTGGAAGC CTTCCTGCAT CGCCTGCAAC
AATAGACAGA ACATCGCCTG CGAAGGCGGC TTTGGAAGAC CAATCAAGCA ATGA
 
Protein sequence
MPFAAPRLCT CGRVVPAGKR CECSIKRKAE RDKLRPAAPQ RGYDAEWRRL SKAYLAETGN 
DVCADCGRPA VLVAHRVSIR KAPHLRLVRS NWKPSCIACN NRQNIACEGG FGRPIKQ