Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0548 |
Symbol | |
ID | 4030840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 606382 |
End bp | 607065 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637969078 |
Product | lipolytic enzyme, G-D-S-L |
Protein accession | YP_575898 |
Protein GI | 92116169 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.386484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATCT CATATGGCAC TTTCTTTACC GCGGTCGAGA GGTGGATGCG CACGTTTGCG TGGCTGCTGC TTGGCGCGGG CATCGCCATG GCAGTGCCGG CACAGGCGGC CGATGGCCCC GTCAAGATCG TGGTGCTCGG CGATTCCTTG AGCGCCGGCC TCGGACTTCC GGCCGCCGCC GCATTTCCGG CACAACTGGA AACGGCGTTG AAAGACAAAG GCCTGAACGT CGCGATCAAC AATGCCGGCG TCTCCGGCGA CACCGCGTCC GGCGGTCTCG ACCGGCTCGA CTGGTCGGTG CCTGTCGGCA CGCAAGGCGT GATCCTCGAA CTGGGCGCAA ACGATGCCCT GCGCGGCATC GATCCCAAGG TGACGCGCGC CGCACTGGAA GAAATCCTGA AGCGGCTGAA GGCGCGCGAT ATCGCGGTCC TGCTGTGCGG CATGGTCGCG CCGCCGAACT ACGGCGCCGA GTATGCCACC CGGTTCAATG CGATCTTTCC CGATCTCGCC AAGACATACG ACGTGCCGCT TTATCCGTTT TTCCTCGACG GTGTCGCGGC GAATACAAGG CTCAATCAGG CCGACGGAAT GCATCCGACC GCCGACGGCG TAGCGGTGAT CGTCGACCAT ATCCTGCCCA CGGTTGAAGC CTTTCTCGGC ACCATCCATG CGCCGAAAAG CTGA
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Protein sequence | MQISYGTFFT AVERWMRTFA WLLLGAGIAM AVPAQAADGP VKIVVLGDSL SAGLGLPAAA AFPAQLETAL KDKGLNVAIN NAGVSGDTAS GGLDRLDWSV PVGTQGVILE LGANDALRGI DPKVTRAALE EILKRLKARD IAVLLCGMVA PPNYGAEYAT RFNAIFPDLA KTYDVPLYPF FLDGVAANTR LNQADGMHPT ADGVAVIVDH ILPTVEAFLG TIHAPKS
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