| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0352 |
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| Symbol | |
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| ID | 4030449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 385392 |
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| End bp | 386624 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637968886 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_575708 |
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| Protein GI | 92115979 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.115416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCTA GGCAACGACT GAGAACCGCT GCGCTCTCGG CGGCGATCAT CGCCTTTGCC
GCCGCAAGCG GCAGCGCCCT CGCCGAGGGG AAGTACGACA GCGGCGCCAG CGATACCGAA
ATCAGGATCG GCAGCACCAT GCCCTACAGC GGCCCGGCCT CCGCATATGG TGTCATCGGC
AAGACCGAAG CCGCCTATTT CAGGATGGTC AACGACAAGG GCGGCATCAA CGGCCGCAAG
ATCGATTTCA TCAGTTATGA CGATGCCTAT AGCCCGCCGA AAGCGGTCGA GCAGACCCGG
AAGCTGATCG AAAGCGACGA TGTGCTCTTC ACCTTCAACG CGCTGGGGAC GGCAACCCAG
ACAGCCGTGC AGAAATACAT GAATGGCAAG AAAGCCCCCC AGCTCTTCGT CGCGAGTGGC
GCCAGCAAGT GGAATGACCC AAAACAGTTC CCGTGGACCA TGGGCTGGCA GCCGAGCTAC
CGCGTCGAGG CGCGGATCTT CGCCAAATAC ATCCTCAAGA CCAGGCCGGA CGCCAGGGTT
GCGGTGTTTT ATGCCAATGA CGACTTCGGC AAGGACTACG TCAGCGGCCT GAAGGATATC
TTCGGCGAGA GGTGGTCGAG CATCGTGGCC GCCAAAGAGA GCTACGAGAA CAGCGAGCCG
TCCATCGCTT CCCACATCGT CAGGCTGAAG GATTCGGGTG CCGACGTGCT GGTCAACATC
TCGACGCCGA AATTCGCCGC ACAGGCCATC AAGAAGGCGG CCGAGATCGG GTGGAAGCCG
ATGCAGCTTC TGACCAACGT CTCGATCTCG AGCGGCGCCG TTATGAAGCC GGCCGGCGTT
GAGGCGTCCG AAGGCGTGCT GTCCGCCGGC TATCTGAAGG ATGCTTCGGA TCCGCAGTGG
GTCAACGACG AGGACATGAA GACGTTCACG GCCTTCGTGG ACAAGTACAT GCCGGGCGCC
AATCTGTCGG ACACCCACCT GATCTACGGT TTCGCCGTGG CGCAGACAGT GGAGCAGGTG
CTCAGGCAAT GCGGCGACGA TCTGACCCGC GAGAACGTCA TGAAGCAGGC GGCGAGCCTG
AAGGATTTCG TGCCGTCCAC CCTGATGCCG GGTATCAGGA TCAACACCGG CGCGGCCGAT
TTTGCGCCGA TCGAGCAGCT TCGGATGATG CAATTCAAGA ACGGACGGTG GGTGTTCTTC
GGCGACACCA TCGGCGCCGG GACGGGCGGG TAG
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| Protein sequence | MSARQRLRTA ALSAAIIAFA AASGSALAEG KYDSGASDTE IRIGSTMPYS GPASAYGVIG
KTEAAYFRMV NDKGGINGRK IDFISYDDAY SPPKAVEQTR KLIESDDVLF TFNALGTATQ
TAVQKYMNGK KAPQLFVASG ASKWNDPKQF PWTMGWQPSY RVEARIFAKY ILKTRPDARV
AVFYANDDFG KDYVSGLKDI FGERWSSIVA AKESYENSEP SIASHIVRLK DSGADVLVNI
STPKFAAQAI KKAAEIGWKP MQLLTNVSIS SGAVMKPAGV EASEGVLSAG YLKDASDPQW
VNDEDMKTFT AFVDKYMPGA NLSDTHLIYG FAVAQTVEQV LRQCGDDLTR ENVMKQAASL
KDFVPSTLMP GIRINTGAAD FAPIEQLRMM QFKNGRWVFF GDTIGAGTGG
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