Gene Nham_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0056 
Symbol 
ID4029766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp63590 
End bp64312 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID637968589 
Productnucleotidyl transferase 
Protein accessionYP_575417 
Protein GI92115688 
COG category[M] Cell wall/membrane/envelope biogenesis
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCA CCCCGACCAA AGCCATGGTG CTCGCCGCGG GCCTCGGCCT GCGGATGCGG 
CCGCTGACGG AGCGGATGCC GAAGCCGATG GTGCCCGTGG CCGGCAAGCC GCTGCTCGAT
CACGTGCTCG ACAGGCTGGC GGATGCGGGC ATCAGTGAAG CGGTCGTCAA CGTACGCTAT
CTGCCGGATC AGATCATCGA TCACGTGGCG CGCCGCAGCC GGCCACGGGT CATCATTTCC
GACGAGCGCG ATGAGGTGCT GGGTACCGGC GGCGCCGTGG TGAAGGCGCT GCCGCTGCTC
GGCGACGCGC CGTTCTTCCA TCTCAATGCC GACACCATGT GGATCGACGG CGCGCGTCCC
AATCTGACGC GGATGACCGA GGCTTTCGAT CCCGCGCGCA TGGACATCCT GCTGCTGATG
GCGCCGACGG CGAGCAGCAT CGGCTATGGC GGCAGCGGTG ACTACGCTAT GCTCCCCGAC
GGCGCGTTGC GCAGGCGGAA AGAGAATCAG GTGGTGCCGT TCGTCTATGC CGGCGCCGCC
ATCATGTCGC CCGCGCTGTT CGCCGGCGCA CCCAGCGGCG AGTTTTCGCT GACGACAATG
TTCGATCGCG CCAACGAACG GGAGCGCCTG TTCGGGCTGC GACTCGACGG CGTCTGGATG
CATGTCGGAA CCCCCGATGC CGTCCAGGCC GCCGAGCAAG CGGTCCTCGT CAGCGTCGCC
TGA
 
Protein sequence
MPVTPTKAMV LAAGLGLRMR PLTERMPKPM VPVAGKPLLD HVLDRLADAG ISEAVVNVRY 
LPDQIIDHVA RRSRPRVIIS DERDEVLGTG GAVVKALPLL GDAPFFHLNA DTMWIDGARP
NLTRMTEAFD PARMDILLLM APTASSIGYG GSGDYAMLPD GALRRRKENQ VVPFVYAGAA
IMSPALFAGA PSGEFSLTTM FDRANERERL FGLRLDGVWM HVGTPDAVQA AEQAVLVSVA