Gene Csal_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1548 
Symbol 
ID4027646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1760888 
End bp1761760 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID637966737 
Productrare lipoprotein A 
Protein accessionYP_573600 
Protein GI92113672 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGG GCGGGGCGCT GCTCTGCATG CTGGTCCTCT TGCTGGCTGG CTGCGCCAGC 
GAGGGAGGCG GTCGCTACGC CCAGCAGCGC GACGCCTATC CGGATGCACC GCCGGACGTG
TCCCAGGTGC CGGACGCGGT GCCCAAGGTC GAGCCGCGAG CCAAGAGCGG CAATCGCTCC
ACCTACGAAG TGTGGGGCAA GACCTACCAT GTGCTGTCCG ACCCAAGCGG CTACGAAGCG
GAAGGGGAGG CGTCATGGTA CGGCACGAAG TTCCAGGGCT ATGACACTGC CAGCGGTGAG
CCCTATGACA TGTACAAGAT GTCGGCGGCA CACCGCACGC TGCCCTTGCC GACCTACGCC
CGGGTCACCA ATCTCGACAA CGGTCGTGAC GTCATCGTGC GCATCAACGA TCGCGGTCCG
TTCCATGGCG ATCGGTTGAT CGACCTTTCC TATGCGGCGG CGGCGCGCCT GAAGATTCTC
GGTGGCGGCA CGGGGCACGT TCGTGTCGAG GCCATTGACC CCAGGCAATG GGCCGAGCAG
CATGAGCGTA CCGGATCGTC GCGCCCGGCA TCGCAGGCTG CGCCTTCCAC CAAGGACGAG
GCCGTCGCGC AGACATCGTC GCCCGCCGCC GAGTCATCAG CGCGCGAGGC ACGTTACGTT
CAGGTGGCGG CCTTCGGGTC CGCGACGAAT GCCAGGGCGC TCGAGGCGCG CCTGAAAGAT
CGTCTGTCGC GCCCGGTGCG CGTGCGCAAG GAAGCGTCGT TGTACCGGGT CCAGGTCGGG
CCGGTTCGCG ATGCAGCACA TATCGATTCC ATCCAGGCGG CACTGCAAGA GGCGGGTTTC
GACCAGTCGT TTGTGGTGTC CGCTGCCGAG TAA
 
Protein sequence
MKWGGALLCM LVLLLAGCAS EGGGRYAQQR DAYPDAPPDV SQVPDAVPKV EPRAKSGNRS 
TYEVWGKTYH VLSDPSGYEA EGEASWYGTK FQGYDTASGE PYDMYKMSAA HRTLPLPTYA
RVTNLDNGRD VIVRINDRGP FHGDRLIDLS YAAAARLKIL GGGTGHVRVE AIDPRQWAEQ
HERTGSSRPA SQAAPSTKDE AVAQTSSPAA ESSAREARYV QVAAFGSATN ARALEARLKD
RLSRPVRVRK EASLYRVQVG PVRDAAHIDS IQAALQEAGF DQSFVVSAAE