Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1106 |
Symbol | |
ID | 4029044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1255878 |
End bp | 1257647 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637966283 |
Product | TrkA-like protein |
Protein accession | YP_573161 |
Protein GI | 92113233 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTTCG ATGCGTGGCT GACGCTGGCC GTGGTGGCGG CGTCGTTCCT GTTGATGGCG CTGAGCCGTC TCGGGCCGGA CGTGATTCTC CTGGGCGCGG TCATCGCGCT GTTCGGCGTC GGCATCATCG ATGCCGACGA GGCCCTGGGA GGCTTTTCCA ACAGCGGCCT GTTCACCGTC GCCTTCATGT ACATCCTCGT GGCAAGCATA CGCGAGACGG GCGGCATCGA CCTGATCATT CGCTACCTGC TGGGCCGGCC GCGACACGAG CTGGGCGCCC AGGGGCGCCT GCTGTTGCCG GTCTCGGCGA TCAGCGCCTT TCTCAACAAC ACGCCGGTGG TGGCGACCTT CCTGCCGGCG GTACTGAGCT GGAGTCGCCG CCTGCGTCTG CCCGCGCACC GCCTGCTGAT GCCGCTGAGC TTCGCCTCGA TCCTGGGCGG CACCTGCTCG CTGATGGGCA CCAGCACCAA CCTGGTGGTC GATGGCCTGC TGCGTGAACG CTATCCCGAG CGTGCCCTGC ACCTGTTCGA CATCGCCTGG GTCGGCGTGC CCGTGGCGCT GGTCGGGCTG GCCTACCTGA TGCTGGTGGG GCGCTGGCTG CTGCCCCGGC GCCGCACCGC ATCGGATGTC TTCGAGAACC CGCGCGAGTA CACCATCGAG ATGCAGGTCG ACCCGCAAGG CCCCATTGTC GACAAGAGCG TCGAGGAAGC CGGGCTGCGC CATCTCGAGG GCCTGTTTCT GGTCGAGATC GAACGCGATG GCAACGTGGT CTCGGTCGTG GGGCGCGGCG AGCGCCTCAA GGCCAATGAT CGCCTGGTCT TCGCTGGGAC CACGGAAGCG GCGGTGGAGT TGCAGCAGAT TCGTGGCTTG CGGCCCACCG GTCAGGGGCA GTCGAGCCTC AAGAAGGCGT TCGCCGAGCG GCGTCTGGTC GAAGCGGTGG TCTCCGAGCA ATGCCAGTTC CTGGGTCGGC GCCTGCGCGA AGGGCATTTC CGAACCTTCT ATGGCGCCTC GGTGCTGGCG GTATGCCGGC ATGGCGAGCG CGTATCCGGC AATCTGGGAC AGATCCGCCT GCAGGCGGCG GACGTGCTGC TCATGGAGGT ACGCCCGGCG TTCGTCGAGC GACATCGTCA GTCGCGCGAC TTCCTGCTGA TCAGCGAGCT CAATGGCCAG GCGCGGCCGC ACCACGAACG CGCCTGGGTG GCATGGAGCA TCATGCTCGG CGTGGTCGGG CTGGCGGCGT TCGGGGTCCT GAGCCTGCTC AAGGCGGCGA TGCTCGGCGT CGCACTGGCG CTGATGACGG GGTGCTGCTC CATCGGCGCG GCCCGTCGTG GACTGGACAC CCAGGTGCTG CTGACCATCG CCGCGTCCTT CGGGCTGGGA GCGGCGATGG AAAGCTCCGG TGCCGCCCAG GTCCTCGCCC AGGGCGCCCT GTCGCTGGCC GATGGCAACC CGTACCTGCT GTTGATCGGA GCGTATCTGG TGGTGGCGTT GCTCACCGAA GTGGTCACCA ACAACGCGGC GGCGGTGATC GCCTTTCCCA TCGTCACCGG AGCCGCGCAG CAATTGGGCG TGGATATCAT GCCCTTCGTG ATCGCGGTGA TGTTCGCCGC CTCGGCCAGC TTCCTGACGC CGATCGGCTA TCAGACCAAC CTGATGGTCT ACGGGCCCGG CGGGTATCGC TTCAGCGACT ATCTGCGCGT CGGGGGCGGC CTGAGTGTAT TGGTGGGCGC GGTGACGCTG GTGCTGATTC CGTTGATCTG GCCGTTCTGA
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Protein sequence | MPFDAWLTLA VVAASFLLMA LSRLGPDVIL LGAVIALFGV GIIDADEALG GFSNSGLFTV AFMYILVASI RETGGIDLII RYLLGRPRHE LGAQGRLLLP VSAISAFLNN TPVVATFLPA VLSWSRRLRL PAHRLLMPLS FASILGGTCS LMGTSTNLVV DGLLRERYPE RALHLFDIAW VGVPVALVGL AYLMLVGRWL LPRRRTASDV FENPREYTIE MQVDPQGPIV DKSVEEAGLR HLEGLFLVEI ERDGNVVSVV GRGERLKAND RLVFAGTTEA AVELQQIRGL RPTGQGQSSL KKAFAERRLV EAVVSEQCQF LGRRLREGHF RTFYGASVLA VCRHGERVSG NLGQIRLQAA DVLLMEVRPA FVERHRQSRD FLLISELNGQ ARPHHERAWV AWSIMLGVVG LAAFGVLSLL KAAMLGVALA LMTGCCSIGA ARRGLDTQVL LTIAASFGLG AAMESSGAAQ VLAQGALSLA DGNPYLLLIG AYLVVALLTE VVTNNAAAVI AFPIVTGAAQ QLGVDIMPFV IAVMFAASAS FLTPIGYQTN LMVYGPGGYR FSDYLRVGGG LSVLVGAVTL VLIPLIWPF
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