| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0293 |
|---|
| Symbol | |
|---|
| ID | 4027063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 332550 |
|---|
| End bp | 333416 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637965443 |
|---|
| Product | shikimate dehydrogenase |
|---|
| Protein accession | YP_572355 |
|---|
| Protein GI | 92112427 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTTG GGTTGATCGG CAAGGGCATC ATGAATTCCA GTTCGCCCGA CCTGCACGTG
CGGCTGGGCA AGCTGACCGG CATTCCCGCT AGCTACGATC TTTTCGACAC GCTGGTGACG
CAGATCGACT CGCTGGAGAG CCAGGTTCGC GAGGTCATGG CGACCGGTTA TCGCGGCGTC
AACGTCACCT ATCCTTACAA GGAGGAGGCG GTGCGTCTGG CAACGCGCGT TGGCGAGGGC
GCGCGCTTGG TCGGCGCTGC CAACACCCTG GTCTTCCAAG ACGACGAGAT CCAGGCCGAG
AACACTGATT TCACCGGCTT CATCAGTGGT TATCGGGCCA CCGTCGGTGA TCGTCCTCCC
GGTCGTGTGT TACTGATAGG CACTGGCGGC GTGGGCAAGG CGGTCGCCTT CGGTCTGGCC
AAGCTGGGCG CCGATGAGGT ATTGCTGATG GACCTCGACC TTGAAAAGGC CGAACGTCTC
GCCCGAGAAC TCGACCACGC CGGCTTCTCG GCTGCAGCGG TTGCACCCGA GGCACTGGAG
GCGACCGCCG CGCGCTGTGA TGGGGTGGTC AACTGCACGC CGATCGGCCA TGAGAAGAGC
CCGGGTTACC CACTGCCTCC AGCGCTCATT CGCGCCGACC AGTGGATCTT CGATGCCGTC
TACGTGCCGG CGGTCACCGA GTTCATCGCC GCCGCCCGGG CGGCAGGGGC CCAAGTCGTC
AGCGGTGTCA GTCTGTTCGT CTTCCAGGGC GTGGATGCCT TCAAGTTCTT CTGCGAGGAT
GCCGACAAGC GGTCGCTGGC CGACGCTCAG GCCGCGACCC TGTTCGATCA TTACAAGCAG
ACCTTGCTGC AGGAGAAGAA TGCATGA
|
|---|
| Protein sequence | MRLGLIGKGI MNSSSPDLHV RLGKLTGIPA SYDLFDTLVT QIDSLESQVR EVMATGYRGV
NVTYPYKEEA VRLATRVGEG ARLVGAANTL VFQDDEIQAE NTDFTGFISG YRATVGDRPP
GRVLLIGTGG VGKAVAFGLA KLGADEVLLM DLDLEKAERL ARELDHAGFS AAAVAPEALE
ATAARCDGVV NCTPIGHEKS PGYPLPPALI RADQWIFDAV YVPAVTEFIA AARAAGAQVV
SGVSLFVFQG VDAFKFFCED ADKRSLADAQ AATLFDHYKQ TLLQEKNA
|
|---|
| |